C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | staphylococcal nuclease and tudor domain containing 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000486037  |
SND1-016 |
ENSG00000197157 |
9606 | + |
7:127887912-128084850  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008LN | CIL_0008LN_0001 | VISTA | 7:127234332-127837492 |
| CIL_0001OG | CIL_0001OG_0001 | CGP | 7:127610292-128092609 |
| CIL_0004Y2 | CIL_0004Y2_0002 | CGP | 7:127652180-128092609 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0008152 | IEA | metabolic process |
| GO:0016788 | IEA | hydrolase activity, acting on ester bonds |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000001460
|
Snd1-001 | protein_coding | Mus_musculus | 0 | 553 |
|
ENSMUST00000164915
|
Snd1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 553 |
|
ENSMUST00000167201
|
Snd1-003 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000165151
|
Snd1-008 | retained_intron | Mus_musculus | 0 | 390 |
|
ENSMUST00000169321
|
Snd1-007 | processed_transcript | Mus_musculus | 0 | 233 |
|
ENSMUST00000171532
|
Snd1-005 | processed_transcript | Mus_musculus | 0 | 226 |
