C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167443 B4galt2-005 ENSMUSG00000028541 10090 - 4:117873021-117883476 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENSMUST00000167443
Transcript ID Muscle Placenta
ENSMUST00000167443 0.823±0.00 0.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599
CIL_0001PP CIL_0001PP_0002 CGP 4:117834506-117875198
CIL_000029 CIL_000029_0002 CGP 4:117869260-117887333

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005975 IEA carbohydrate metabolic process
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309519 B4GALT2-201 protein_coding Homo_sapiens 0 1299
ENST00000356836 B4GALT2-001 protein_coding Homo_sapiens 0 1295
ENST00000372324 B4GALT2-202 protein_coding Homo_sapiens 0 1299
ENST00000434555 B4GALT2-002 protein_coding Homo_sapiens 0 1295
ENST00000481924 B4GALT2-006 processed_transcript Homo_sapiens 0 595
ENST00000485678 B4GALT2-005 processed_transcript Homo_sapiens 0 726
ENST00000497866 B4GALT2-004 processed_transcript Homo_sapiens 0 725
ENST00000498543 B4GALT2-003 processed_transcript Homo_sapiens 0 318

Loading