C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sel-1 suppressor of lin-12-like (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167466 Sel1l-006 ENSMUSG00000020964 10090 - 12:91806621-91849129 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167466 17.165±1.50 25.091±3.19 2.894±0.61 4.230±2.01 13.988±1.31 16.125±1.97 6.945±0.24 10.439±2.02 10.088±7.75 17.483±1.46 1.836±0.45 20.120±8.22 8.141±0.98 4.618±1.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0002 VISTA 12:91377577-91981083
CIL_0000TE CIL_0000TE_0002 CGP 12:91638542-91849157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0007219 IEA Notch signaling pathway
GO:0016021 IEA integral component of membrane
GO:0034976 IMP response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336735 SEL1L-001 protein_coding Homo_sapiens 0 2446
ENST00000554744 SEL1L-007 retained_intron Homo_sapiens 0 569
ENST00000555824 SEL1L-003 protein_coding Homo_sapiens 0 464
ENST00000555923 SEL1L-005 retained_intron Homo_sapiens 0 204

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