C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 67
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167588 Trim67-201 ENSMUSG00000036913 10090 + 8:124793019-124834702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000167588
Transcript ID Brain
ENSMUST00000167588 23.057±7.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_000619 CIL_000619_0002 CGP 8:124740257-124834713
CIL_000050 CIL_000050_0002 CGP 8:124793019-124863029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008270 IEA zinc ion binding
GO:0010976 IDA positive regulation of neuron projection development
GO:0046580 IMP negative regulation of Ras protein signal transduction
GO:2000060 IDA positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295851 ABI2-001 protein_coding Homo_sapiens 0.0001 57
ENST00000298875 CPSF2-001 protein_coding Homo_sapiens 0.0000001 66
ENST00000334731 C9orf85-004 protein_coding Homo_sapiens 0.000000000005 77
ENST00000356178 ZNF527-002 nonsense_mediated_decay Homo_sapiens 0.00000000007 75
ENST00000359195 PIK3CG-003 protein_coding Homo_sapiens 0.00000005 66
ENST00000366653 TRIM67-001 protein_coding Homo_sapiens 0 2483
ENST00000376296 MUC21-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000379959 IL2RA-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000383535 C6orf205-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000420532 C6orf205-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000426739 ZNF234-001 protein_coding Homo_sapiens 0.00000000006 75
ENST00000428463 ZNF630-004 nonsense_mediated_decay Homo_sapiens 0.0000005 60
ENST00000430305 C6orf205-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000436120 ZNF527-004 protein_coding Homo_sapiens 0.00000000004 75
ENST00000438118 VDAC1P8-014 retained_intron Homo_sapiens 0.000000008 66
ENST00000440457 C6orf205-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000444294 TRIM67-003 protein_coding Homo_sapiens 0 2584
ENST00000449018 TRIM67-002 protein_coding Homo_sapiens 0 1812
ENST00000451480 C6orf205-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000451668 FUCA2-003 protein_coding Homo_sapiens 0.000000006 66
ENST00000457728 C6orf205-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000461688 CREB3L4-011 processed_transcript Homo_sapiens 0.0000000002 71
ENST00000467190 MIA3-008 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000474962 CLIP2-007 retained_intron Homo_sapiens 0.00000000003 73
ENST00000479413 C9orf85-001 nonsense_mediated_decay Homo_sapiens 0.000000000003 77
ENST00000481865 TNK2-009 retained_intron Homo_sapiens 0.00000000008 75
ENST00000488118 XPNPEP1-001 retained_intron Homo_sapiens 0.00000001 68
ENST00000491998 DFFB-005 nonsense_mediated_decay Homo_sapiens 0.000000007 68
ENST00000496166 PIK3CG-002 protein_coding Homo_sapiens 0.00000004 66
ENST00000497735 MAP4-008 retained_intron Homo_sapiens 0.00000000003 75
ENST00000506007 TTC37-011 retained_intron Homo_sapiens 0.0000003 60
ENST00000549240 C14orf79-007 protein_coding Homo_sapiens 0.0000003 62
ENST00000551904 C6orf205-202 protein_coding Homo_sapiens 0.00000003 66
ENST00000582678 ACE-003 nonsense_mediated_decay Homo_sapiens 0.0000009 60
ENST00000589563 VDAC1P8-003 processed_transcript Homo_sapiens 0.000000006 66
ENST00000602150 SCN1B-004 retained_intron Homo_sapiens 0.000000008 68
ENST00000610068 VDAC1P8-009 processed_transcript Homo_sapiens 0.00000001 66
ENST00000622321 VDAC1P8-010 retained_intron Homo_sapiens 0.000000007 66

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