C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167595 Fyco1-201 ENSMUSG00000025241 10090 - 9:123789510-123851899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167595 6.001±1.42 6.438±1.78 7.252±1.66 2.980±1.30 5.502±2.12 3.977±0.43 17.345±8.25 4.628±0.53 3.140±1.14 7.821±0.76 31.341±3.19 5.446±2.74 3.104±1.39 10.710±2.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OM CIL_0003OM_0002 CGP 9:123789510-123851899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005764 ISS lysosome
GO:0005770 ISS late endosome
GO:0005776 ISS autophagic vacuole
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0046872 IEA metal ion binding
GO:0072383 ISS plus-end-directed vesicle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296137 FYCO1-001 protein_coding Homo_sapiens 0 2135
ENST00000433878 FYCO1-003 protein_coding Homo_sapiens 0 867
ENST00000438446 FYCO1-006 protein_coding Homo_sapiens 0 924
ENST00000535325 FYCO1-201 protein_coding Homo_sapiens 0 1546

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