C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296137 FYCO1-001 ENSG00000163820 9606 - 3:45917904-45995815 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296137 10.545±0.00 6.533±0.00 0.891±0.00 1.121±0.78 5.607±2.23 8.076±6.89 20.883±17.40 3.485±0.00 2.840±1.20 3.422±2.17 17.544±7.17 5.993±5.59 2.096±0.09 3.163±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OM CIL_0003OM_0001 CGP 3:45917899-45995824

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005776 IDA autophagic vacuole
GO:0006810 IEA transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0046872 IEA metal ion binding
GO:0072383 IMP plus-end-directed vesicle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167595 Fyco1-201 protein_coding Mus_musculus 0 2135
ENSMUST00000084715 Fyco1-001 protein_coding Mus_musculus 0 2135
ENSMUST00000184082 Fyco1-002 protein_coding Mus_musculus 0 948

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