C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163820-ENSG00000163820 CGP 9606 3:45917899-45995824
GeneTranscriptPositionBiotype
ENSG00000163820 (FYCO1)
FYVE and coiled-coil domain containing 1 		ENST00000296137 (FYCO1-001) 45917904-45995815 protein_coding
ENST00000433878 (FYCO1-003) 45917904-45958572 protein_coding
ENST00000438446 (FYCO1-006) 45921585-45958661 protein_coding
ENST00000471739 (FYCO1-005) 45984581-45995824 retained_intron
ENST00000535325 (FYCO1-201) 45917899-45995824 protein_coding
ENSG00000172215 (CXCR6)
chemokine (C-X-C motif) receptor 6 		ENST00000304552 (CXCR6-001) 45943472-45948353 protein_coding
ENST00000438735 (CXCR6-002) 45940933-45948337 protein_coding
ENST00000457814 (CXCR6-003) 45945049-45947510 protein_coding
ENST00000458629 (CXCR6-004) 45945019-45947823 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003OM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025241-ENSMUSG00000025241 CGP 10090 9:123789510-123851899
GeneTranscriptPositionBiotype
ENSMUSG00000025241 (Fyco1)
FYVE and coiled-coil domain containing 1 		ENSMUST00000084715 (Fyco1-001) 123789886-123851566 protein_coding
ENSMUST00000167595 (Fyco1-201) 123789510-123851899 protein_coding
ENSMUST00000183700 (Fyco1-003) 123838182-123851886 retained_intron
ENSMUST00000184082 (Fyco1-002) 123830013-123851881 protein_coding
ENSMUSG00000048521 (Cxcr6)
chemokine (C-X-C motif) receptor 6 		ENSMUST00000049810 (Cxcr6-201) 123806477-123811754 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OM_0001ENSG00000163820ENST00000296137ENST00000433878ENST00000438446ENST00000471739ENST00000535325ENSG00000172215ENST00000304552ENST00000438735ENST00000457814ENST00000458629CIL_0003OM_0002ENSMUSG00000025241ENSMUST00000084715ENSMUST00000167595ENSMUST00000183700ENSMUST00000184082ENSMUSG00000048521ENSMUST00000049810
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OM_0001ENSG00000163820ENST00000296137ENST00000433878ENST00000535325ENSG00000172215ENST00000304552ENST00000438735ENST00000457814ENST00000458629CIL_0003OM_0002ENSMUSG00000025241ENSMUST00000084715ENSMUST00000167595ENSMUSG00000048521ENSMUST00000049810
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163820 ENST00000296137 10.545±0.00 6.533±0.00 0.891±0.00 1.121±0.78 5.607±2.23 8.076±6.89 20.883±17.40 3.485±0.00 2.840±1.20 3.422±2.17 17.544±7.17 5.993±5.59 2.096±0.09 3.163±2.38
ENST00000433878 N/A 5.478±0.00 N/A 0.108±0.00 5.282±0.00 11.168±0.00 14.411±0.00 2.437±0.00 1.021±0.00 5.062±0.00 7.508±2.24 4.327±2.16 1.366±0.03 0.553±0.00
ENST00000438446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535325 N/A N/A N/A N/A N/A N/A N/A 0.912±0.00 2.021±0.00 N/A 1.928±0.00 N/A N/A N/A
ENSG00000172215 ENST00000304552 N/A 2.337±0.00 N/A N/A 0.857±0.68 0.225±0.00 0.154±0.06 0.444±0.11 0.724±0.05 1.933±0.00 0.792±0.00 0.780±0.17 1.960±0.46 0.076±0.03
ENST00000438735 0.037±0.00 N/A N/A 0.142±0.11 0.638±0.00 N/A N/A N/A N/A N/A 0.653±0.63 0.262±0.02 3.450±1.12 N/A
ENST00000457814 0.147±0.00 N/A 0.850±0.00 N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458629 0.034±0.00 N/A 0.377±0.00 0.088±0.07 0.338±0.30 0.279±0.25 0.261±0.12 0.236±0.00 0.861±0.00 0.561±0.33 0.184±0.14 0.425±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025241 ENSMUST00000084715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.314±0.00 1.588±0.00 5.487±0.00
ENSMUST00000167595 6.001±1.42 6.438±1.78 7.252±1.66 2.980±1.30 5.502±2.12 3.977±0.43 17.345±8.25 4.628±0.53 3.140±1.14 7.821±0.76 31.341±3.19 5.446±2.74 3.104±1.39 10.710±2.51
ENSMUST00000183700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048521 ENSMUST00000049810 0.860±0.29 0.326±0.05 0.595±0.10 0.060±0.00 4.136±0.95 0.665±0.38 0.225±0.06 0.572±0.21 0.310±0.29 1.252±0.33 0.067±0.09 0.627±0.20 0.246±0.14 0.155±0.06

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