C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167679 Ptpro-203 ENSMUSG00000030223 10090 + 6:137252299-137464629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000167679
Transcript ID Adipose Adrenal Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000167679 0.142±0.00 0.049±0.01 0.261±0.05 2.509±1.14 0.013±0.00 0.021±0.00 0.094±0.04 0.047±0.04 0.272±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000375 CIL_000375_0002 CGP 6:137054825-137464629
CIL_0005VB CIL_0005VB_0003 CGP 6:137252299-137654876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281171 PTPRO-001 protein_coding Homo_sapiens 0 1720
ENST00000348962 PTPRO-002 protein_coding Homo_sapiens 0 3081
ENST00000442921 PTPRO-004 protein_coding Homo_sapiens 0 1371
ENST00000445537 PTPRO-006 protein_coding Homo_sapiens 0 1177
ENST00000538907 PTPRO-009 retained_intron Homo_sapiens 0 446
ENST00000542557 PTPRO-005 protein_coding Homo_sapiens 0 1810
ENST00000543886 PTPRO-003 protein_coding Homo_sapiens 0 893
ENST00000544244 PTPRO-007 protein_coding Homo_sapiens 0 1615

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