C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear respiratory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167972 Nrf1-204 ENSMUSG00000058440 10090 + 6:30089895-30151677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleOvaryPlacentaTestisENSMUST00000167972
Transcript ID Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000167972 2.024±0.05 1.937±0.00 0.863±0.04 7.261±0.00 4.467±0.00 5.041±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YF CIL_0001YF_0002 CGP 6:30047988-30304539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007005 IMP mitochondrion organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223190 NRF1-001 protein_coding Homo_sapiens 0 2150
ENST00000311967 NRF1-002 protein_coding Homo_sapiens 0 1903
ENST00000353868 NRF1-201 protein_coding Homo_sapiens 0 1901
ENST00000393230 NRF1-003 protein_coding Homo_sapiens 0 2148
ENST00000393232 NRF1-202 protein_coding Homo_sapiens 0 2145
ENST00000454688 NRF1-005 protein_coding Homo_sapiens 0 891

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