C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 1-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412391 U2AF1L4-201 ENSG00000161265 9606 - 19:35742529-35745442 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043273 U2af1l4-001 protein_coding Mus_musculus 0 920
ENSMUST00000167042 U2af1l4-003 nonsense_mediated_decay Mus_musculus 0 918
ENSMUST00000171912 U2af1l4-004 nonsense_mediated_decay Mus_musculus 0 905
ENSMUST00000167361 U2af1l4-015 processed_transcript Mus_musculus 0 872
ENSMUST00000163464 U2af1l4-035 protein_coding Mus_musculus 0 787
ENSMUST00000165773 U2af1l4-022 retained_intron Mus_musculus 0 780
ENSMUST00000166510 U2af1l4-018 protein_coding Mus_musculus 0 715
ENSMUST00000163654 U2af1l4-008 protein_coding Mus_musculus 0 715
ENSMUST00000165524 U2af1l4-038 processed_transcript Mus_musculus 0 686
ENSMUST00000163330 U2af1l4-033 protein_coding Mus_musculus 0 654
ENSMUST00000167501 U2af1l4-011 nonsense_mediated_decay Mus_musculus 0 627
ENSMUST00000166960 U2af1l4-009 processed_transcript Mus_musculus 0 617
ENSMUST00000163482 U2af1l4-005 protein_coding Mus_musculus 0 536
ENSMUST00000108161 U2af1l4-002 nonsense_mediated_decay Mus_musculus 0 532
ENSMUST00000165543 U2af1l4-027 retained_intron Mus_musculus 0 514
ENSMUST00000168931 U2af1l4-013 protein_coding Mus_musculus 0 507
ENSMUST00000166257 U2af1l4-006 protein_coding Mus_musculus 0 486
ENSMUST00000165722 U2af1l4-034 nonsense_mediated_decay Mus_musculus 0 483
ENSMUST00000169283 U2af1l4-025 retained_intron Mus_musculus 0 440
ENSMUST00000164438 U2af1l4-010 retained_intron Mus_musculus 0 440
ENSMUST00000168333 U2af1l4-037 nonsense_mediated_decay Mus_musculus 0 420
ENSMUST00000168229 U2af1l4-007 nonsense_mediated_decay Mus_musculus 0 418
ENSMUST00000167202 U2af1l4-014 processed_transcript Mus_musculus 0 396
ENSMUST00000163276 U2af1l4-028 nonsense_mediated_decay Mus_musculus 0 396
ENSMUST00000169911 U2af1l4-020 retained_intron Mus_musculus 0 396
ENSMUST00000169071 U2af1l4-026 retained_intron Mus_musculus 0 394
ENSMUST00000171850 U2af1l4-039 protein_coding Mus_musculus 0 377
ENSMUST00000164365 U2af1l4-036 nonsense_mediated_decay Mus_musculus 0 342
ENSMUST00000168222 U2af1l4-021 retained_intron Mus_musculus 0 326
ENSMUST00000168555 U2af1l4-016 nonsense_mediated_decay Mus_musculus 0 320
ENSMUST00000165009 U2af1l4-031 retained_intron Mus_musculus 0 316
ENSMUST00000169962 U2af1l4-024 retained_intron Mus_musculus 0 298
ENSMUST00000163848 U2af1l4-019 nonsense_mediated_decay Mus_musculus 0 254
ENSMUST00000170453 U2af1l4-017 retained_intron Mus_musculus 0 241
ENSMUST00000166864 U2af1l4-029 processed_transcript Mus_musculus 0 207
ENSMUST00000167024 U2af1l4-012 retained_intron Mus_musculus 2e-24 117
ENSMUST00000171364 U2af1l4-032 processed_transcript Mus_musculus 7e-24 115
ENSMUST00000163994 U2af1l4-023 retained_intron Mus_musculus 0.000000000001 79

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