C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipoprotein lipase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168401 Lpl-002 ENSMUSG00000015568 10090 + 8:68880555-68907448 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000168401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000168401 1599.247±1108.75 142.821±48.95 8.529±0.00 14.154±0.00 434.160±66.76 13.707±2.76 374.572±79.05 49.005±21.49 4.084±3.05 29.768±8.93 77.435±15.27 5.066±3.08 2.309±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TK CIL_0003TK_0002 CGP 8:68793929-68907448
CIL_0003TS CIL_0003TS_0002 CGP 8:68880491-69089235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004465 IDA lipoprotein lipase activity
GO:0004806 IDA triglyceride lipase activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005886 IEA plasma membrane
GO:0009986 IDA cell surface
GO:0010744 IGI positive regulation of macrophage derived foam cell differentiation
GO:0019433 IDA triglyceride catabolic process
GO:0031225 IEA anchored component of membrane
GO:0034361 IEA very-low-density lipoprotein particle
GO:0042627 IEA chylomicron

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311322 LPL-001 protein_coding Homo_sapiens 0 1733
ENST00000519773 LPL-007 nonsense_mediated_decay Homo_sapiens 7e-32 141
ENST00000520959 LPL-006 protein_coding Homo_sapiens 0 603
ENST00000521994 LPL-005 processed_transcript Homo_sapiens 0 298
ENST00000522701 LPL-004 protein_coding Homo_sapiens 0 405
ENST00000523696 LPL-008 retained_intron Homo_sapiens 0 281
ENST00000524029 LPL-003 protein_coding Homo_sapiens 0 455

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