C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAD1 homolog (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168408 Rad1-004 ENSMUSG00000022248 10090 + 15:10486475-10493363 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000168408
Transcript ID Ovary Placenta
ENSMUST00000168408 3.136±0.74 4.049±1.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231383 RAD1P1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000325577 RAD1-002 nonsense_mediated_decay Homo_sapiens 0 841
ENST00000341754 RAD1-003 protein_coding Homo_sapiens 0 636
ENST00000382038 RAD1-001 protein_coding Homo_sapiens 0 636
ENST00000506311 RAD1-004 retained_intron Homo_sapiens 0 213
ENST00000511456 RAD1-006 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000513914 RAD1-005 nonsense_mediated_decay Homo_sapiens 0 636

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