C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenylosuccinate lyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168756 Adsl-004 ENSMUSG00000022407 10090 + 15:80948548-80968748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168756 4.644±0.88 5.359±1.76 5.609±0.00 3.653±0.00 5.711±1.12 4.774±0.27 7.820±0.99 9.151±0.62 4.089±1.81 5.817±0.00 10.686±0.00 4.763±0.16 4.158±1.30 2.602±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F2 CIL_0006F2_0002 CGP 15:80711319-80970947

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004018 ISA N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
GO:0005739 IDA mitochondrion
GO:0006167 ISA AMP biosynthetic process
GO:0006189 IEA 'de novo' IMP biosynthetic process
GO:0044208 IEA 'de novo' AMP biosynthetic process
GO:0070626 IEA (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216194 ADSL-017 protein_coding Homo_sapiens 0 1236
ENST00000342312 ADSL-002 protein_coding Homo_sapiens 0 1002
ENST00000466863 ADSL-003 retained_intron Homo_sapiens 0 359
ENST00000477111 ADSL-005 retained_intron Homo_sapiens 0 359
ENST00000623063 ADSL-001 protein_coding Homo_sapiens 0 1238
ENST00000623287 ADSL-012 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000623632 ADSL-010 protein_coding Homo_sapiens 0 891
ENST00000623978 ADSL-011 protein_coding Homo_sapiens 0 671
ENST00000624474 ADSL-013 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000624503 ADSL-007 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000625194 ADSL-014 protein_coding Homo_sapiens 0 737

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