C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003HS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000066248-ENSG00000115488 CGP 9606 2:232878686-233035057
GeneTranscriptPositionBiotype
ENSG00000066248 (NGEF)
neuronal guanine nucleotide exchange factor 		ENST00000264051 (NGEF-001) 232878686-233013272 protein_coding
ENST00000373552 (NGEF-003) 232879215-232928154 protein_coding
ENST00000409079 (NGEF-002) 232894602-232928154 protein_coding
ENST00000414326 (NGEF-010) 232970043-232974796 protein_coding
ENST00000416114 (NGEF-004) 232885323-232901462 protein_coding
ENST00000420650 (NGEF-006) 232892898-232905849 protein_coding
ENST00000424488 (NGEF-008) 232882229-232890980 protein_coding
ENST00000458735 (NGEF-005) 232891349-232901440 protein_coding
ENST00000461944 (NGEF-007) 232884924-232890980 retained_intron
ENST00000489127 (NGEF-009) 232882253-232885536 retained_intron
CIL_0003HS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026259-ENSMUSG00000079434 CGP 10090 1:87476834-87597845
GeneTranscriptPositionBiotype
ENSMUSG00000026259 (Ngef)
neuronal guanine nucleotide exchange factor 		ENSMUST00000027477 (Ngef-002) 87476834-87510362 protein_coding
ENSMUST00000068681 (Ngef-001) 87476834-87573870 protein_coding
ENSMUST00000166463 (Ngef-004) 87479729-87486217 retained_intron
ENSMUST00000168235 (Ngef-003) 87478685-87486177 protein_coding
ENSMUSG00000079434 (Neu2)
neuraminidase 2 		ENSMUST00000070898 (Neu2-001) 87594550-87597827 protein_coding
ENSMUST00000163606 (Neu2-005) 87574046-87596565 protein_coding
ENSMUST00000164128 (Neu2-002) 87584037-87597845 protein_coding
ENSMUST00000165109 (Neu2-003) 87594550-87597821 protein_coding
ENSMUST00000166055 (Neu2-006) 87509889-87596670 protein_coding
ENSMUST00000166259 (Neu2-004) 87574027-87597821 protein_coding
ENSMUST00000172222 (Neu2-201) 87574027-87597838 protein_coding
ENSMUSG00000090994 (Gm6153)
predicted gene 6153 		ENSMUST00000172004 (Gm6153-001) 87543635-87544692 processed_pseudogene
ENSMUSG00000091123 (Gm17181)
predicted gene 17181 		ENSMUST00000168856 (Gm17181-001) 87514175-87514297 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HS_0001ENSG00000066248ENST00000264051ENST00000373552ENST00000409079ENST00000414326ENST00000416114ENST00000420650ENST00000424488ENST00000458735ENST00000461944ENST00000489127CIL_0003HS_0002ENSMUSG00000026259ENSMUST00000027477ENSMUST00000068681ENSMUST00000166463ENSMUST00000168235ENSMUSG00000079434ENSMUST00000070898ENSMUST00000163606ENSMUST00000164128ENSMUST00000165109ENSMUST00000166055ENSMUST00000166259ENSMUST00000172222ENSMUSG00000090994ENSMUST00000172004ENSMUSG00000091123ENSMUST00000168856
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HS_0001ENSG00000066248ENST00000264051ENST00000373552CIL_0003HS_0002ENSMUSG00000026259ENSMUST00000027477ENSMUST00000068681ENSMUST00000166463ENSMUST00000168235ENSMUSG00000079434ENSMUST00000070898ENSMUST00000164128ENSMUST00000165109ENSMUST00000166055ENSMUST00000166259ENSMUST00000172222ENSMUSG00000090994ENSMUST00000172004ENSMUSG00000091123ENSMUST00000168856
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066248 ENST00000264051 N/A N/A N/A N/A N/A N/A N/A 4.380±0.00 6.696±0.00 N/A N/A N/A N/A N/A
ENST00000373552 N/A N/A N/A 34.190±16.55 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026259 ENSMUST00000027477 0.668±0.52 0.127±0.06 1.992±0.26 44.642±58.08 0.436±0.17 N/A 0.183±0.04 N/A 0.568±0.00 1.779±0.26 N/A 3.456±1.13 0.457±0.35 0.345±0.17
ENSMUST00000068681 0.903±0.16 0.040±0.01 0.570±0.00 N/A 0.428±0.15 7.687±1.08 0.159±0.07 11.154±2.50 5.983±2.30 1.602±0.40 N/A 2.093±1.03 0.236±0.11 N/A
ENSMUST00000166463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.229±0.00 0.682±0.20 1.314±0.00
ENSMUST00000168235 N/A 0.092±0.02 N/A 41.569±0.00 N/A 4.921±0.00 0.051±0.00 N/A 5.253±0.90 N/A N/A 2.816±0.00 1.310±0.00 N/A
ENSMUSG00000079434 ENSMUST00000070898 N/A N/A N/A N/A 21.394±7.02 N/A 0.108±0.01 N/A N/A 1.736±0.00 4.090±1.04 N/A 0.274±0.21 0.800±0.00
ENSMUST00000163606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164128 N/A N/A N/A N/A 7.498±1.39 N/A N/A N/A N/A 1.421±0.00 0.852±0.00 N/A 0.274±0.00 N/A
ENSMUST00000165109 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.073±0.00 2.461±0.28 N/A N/A N/A
ENSMUST00000166055 N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166259 N/A N/A N/A N/A 0.496±0.00 N/A N/A 7.254±2.07 N/A 2.108±0.40 N/A N/A N/A 0.211±0.00
ENSMUST00000172222 N/A N/A N/A N/A N/A N/A N/A 4.834±0.68 N/A N/A N/A N/A N/A 0.290±0.00
ENSMUSG00000090994 ENSMUST00000172004 N/A N/A 0.008±0.00 0.008±0.00 N/A N/A N/A 0.065±0.00 0.060±0.03 N/A 0.092±0.06 0.216±0.18 0.182±0.25 0.378±0.00
ENSMUSG00000091123 ENSMUST00000168856 N/A N/A N/A N/A N/A N/A N/A 1675.860±171.86 N/A N/A N/A N/A 38.096±0.00 N/A

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