C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin T1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168928 Ccnt1-003 ENSMUSG00000011960 10090 - 15:98543211-98567636 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonTestisENSMUST00000168928
Transcript ID Colon Testis
ENSMUST00000168928 1.382±0.06 0.909±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068F CIL_00068F_0002 CGP 15:98518821-98570923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0003677 ISO DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 ISO protein phosphorylation
GO:0017069 IDA snRNA binding
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261900 CCNT1-001 protein_coding Homo_sapiens 0 1493
ENST00000417344 CCNT1-004 nonsense_mediated_decay Homo_sapiens 0 2148
ENST00000550457 CCNT1-002 retained_intron Homo_sapiens 0 213
ENST00000618666 CCNT1-201 protein_coding Homo_sapiens 0 2148

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