C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: striatin, calmodulin binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169503 Strn3-202 ENSMUSG00000020954 10090 - 12:51608541-51691914 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169503 12.816±2.47 69.388±5.80 20.335±7.05 6.646±1.33 14.534±2.68 13.196±3.12 12.921±2.24 9.404±0.72 8.643±4.91 19.847±6.84 34.541±9.69 26.579±9.89 12.535±5.54 2.623±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KV CIL_0007KV_0003 UCNEbase 12:51002016-51608860
CIL_0004EI CIL_0004EI_0002 CGP 12:51593341-51691914
CIL_0003SU CIL_0003SU_0002 CGP 12:51608541-51738939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126967 strn3-001 protein_coding Danio_rerio 0 233
ENST00000355683 STRN3-001 protein_coding Homo_sapiens 0 3539
ENST00000357479 STRN3-002 protein_coding Homo_sapiens 0 1882
ENST00000554124 STRN3-008 retained_intron Homo_sapiens 0 935
ENST00000554991 STRN3-005 protein_coding Homo_sapiens 0 250
ENST00000555152 STRN3-006 protein_coding Homo_sapiens 0 569
ENST00000555358 STRN3-003 nonsense_mediated_decay Homo_sapiens 0 1517
ENST00000556577 STRN3-004 protein_coding Homo_sapiens 0 363

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