C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM homeobox protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169671 Lhx8-004 ENSMUSG00000096225 10090 - 3:154306978-154328166 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000169671
Transcript ID Adrenal Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169671 0.355±0.00 1.528±0.52 1.472±1.13 0.040±0.00 0.020±0.00 0.247±0.00 0.145±0.00 1.797±1.79 0.717±0.70 0.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047K CIL_00047K_0002 CGP 3:153973436-154330561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001674 IDA female germ cell nucleus
GO:0007611 IMP learning or memory
GO:0008585 IMP female gonad development
GO:0021879 IMP forebrain neuron differentiation
GO:0021884 IGI forebrain neuron development
GO:0042475 IMP odontogenesis of dentin-containing tooth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294638 LHX8-001 protein_coding Homo_sapiens 0 791
ENST00000356261 LHX8-002 protein_coding Homo_sapiens 0 791

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