C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin T1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169707 Ccnt1-001 ENSMUSG00000011960 10090 - 15:98538689-98570923 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169707 2.115±1.19 1.820±0.15 5.280±0.11 3.712±0.23 1.755±0.97 1.419±0.66 1.682±0.63 0.957±0.43 1.487±0.54 3.062±1.90 1.890±0.63 2.370±2.23 4.149±2.57 1.244±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068F CIL_00068F_0002 CGP 15:98518821-98570923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0003677 ISO DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 ISO protein phosphorylation
GO:0007049 IEA cell cycle
GO:0008024 ISS positive transcription elongation factor complex b
GO:0017069 IDA snRNA binding
GO:0019901 IEA protein kinase binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261900 CCNT1-001 protein_coding Homo_sapiens 0 2856
ENST00000417344 CCNT1-004 nonsense_mediated_decay Homo_sapiens 0 1493
ENST00000550457 CCNT1-002 retained_intron Homo_sapiens 0 213
ENST00000618666 CCNT1-201 protein_coding Homo_sapiens 0 1783

Loading