C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 12 open reading frame 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548883 C12orf42-001 ENSG00000179088 9606 - 12:103301943-103495968 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverPlacentaTestisENST00000548883
Transcript ID Adrenal Brain Liver Placenta Testis
ENST00000548883 0.261±0.00 0.024±0.00 0.035±0.00 0.053±0.00 2.529±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008O5 CIL_0008O5_0001 VISTA 12:102651485-103252902
CIL_0008WZ CIL_0008WZ_0001 VISTA 12:102677571-103278832
CIL_0008TA CIL_0008TA_0001 VISTA 12:102711332-103315018
CIL_0009AL CIL_0009AL_0001 VISTA 12:102712107-103314512
CIL_0008NV CIL_0008NV_0001 VISTA 12:102712346-103314376
CIL_0008OX CIL_0008OX_0001 VISTA 12:102790564-103391741
CIL_00083Z CIL_00083Z_0001 VISTA 12:102877204-103479620
CIL_0007WM CIL_0007WM_0001 VISTA 12:102920166-103521542

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189775 1700113H08Rik-002 protein_coding Mus_musculus 0 305
ENSMUST00000169849 1700113H08Rik-001 protein_coding Mus_musculus 0 305
ENSMUST00000189456 1700113H08Rik-003 protein_coding Mus_musculus 0 305

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