C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Mdm2, transformed 3T3 cell double minute p53 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170046 Mtbp-002 ENSMUSG00000022369 10090 + 15:55557595-55610813 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonOvaryTestisENSMUST00000170046
Transcript ID Adipose Adrenal Breast Colon Ovary Testis
ENSMUST00000170046 1.252±0.00 0.274±0.00 0.469±0.00 0.620±0.12 0.751±0.32 3.136±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009J CIL_00009J_0003 CGP 15:55307750-55557748
CIL_00008U CIL_00008U_0003 CGP 15:55534094-55626423
CIL_0002GD CIL_0002GD_0003 CGP 15:55557408-55906949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IDA kinetochore
GO:0005515 IPI protein binding
GO:0007050 IEA cell cycle arrest
GO:0007089 IDA traversing start control point of mitotic cell cycle
GO:0008285 IDA negative regulation of cell proliferation
GO:0045839 IDA negative regulation of mitosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305949 MTBP-001 protein_coding Homo_sapiens 0 1428
ENST00000456899 MTBP-005 retained_intron Homo_sapiens 0 219
ENST00000522308 MTBP-002 retained_intron Homo_sapiens 0 377
ENST00000523373 MTBP-003 nonsense_mediated_decay Homo_sapiens 0 917

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