C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002GD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090447-ENSDARG00000041729 CGP 7955 16:17392873-17558409
GeneTranscriptPositionBiotype
ENSDARG00000041729 (sntb1)
syntrophin, basic 1 		ENSDART00000061164 (sntb1-201) 17459976-17558354 protein_coding
ENSDART00000125691 (sntb1-001) 17460293-17558409 protein_coding
ENSDARG00000090447 (MTBP)
MDM2 binding protein 		ENSDART00000129251 (MTBP-201) 17392873-17442440 protein_coding
CIL_0002GD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172167-ENSG00000172164 CGP 9606 8:120445400-120813273
GeneTranscriptPositionBiotype
ENSG00000172164 (SNTB1)
syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 		ENST00000395601 (SNTB1-001) 120535745-120813273 protein_coding
ENST00000517992 (SNTB1-002) 120538521-120812143 protein_coding
ENST00000519177 (SNTB1-003) 120570259-120811563 processed_transcript
ENST00000519298 (SNTB1-005) 120632610-120693908 processed_transcript
ENST00000520717 (SNTB1-004) 120811759-120812852 protein_coding
ENSG00000172167 (MTBP)
MDM2 binding protein 		ENST00000305949 (MTBP-001) 120445426-120523635 protein_coding
ENST00000456899 (MTBP-005) 120445400-120451335 retained_intron
ENST00000519188 (MTBP-006) 120488161-120490703 retained_intron
ENST00000519556 (MTBP-007) 120518703-120541965 nonsense_mediated_decay
ENST00000519841 (MTBP-008) 120538695-120542133 processed_transcript
ENST00000522308 (MTBP-002) 120445422-120452829 retained_intron
ENST00000522449 (MTBP-004) 120459276-120473950 retained_intron
ENST00000523373 (MTBP-003) 120445422-120470937 nonsense_mediated_decay
ENSG00000172172 (MRPL13)
mitochondrial ribosomal protein L13 		ENST00000306185 (MRPL13-001) 120395847-120445386 protein_coding
ENST00000518696 (MRPL13-003) 120395437-120445402 nonsense_mediated_decay
ENST00000518918 (MRPL13-005) 120413991-120445092 protein_coding
ENST00000520677 (MRPL13-004) 120419656-120445099 retained_intron
ENST00000521648 (MRPL13-007) 120380761-120414112 nonsense_mediated_decay
ENST00000522717 (MRPL13-006) 120395847-120414191 retained_intron
ENST00000613356 (MRPL13-002) 120395848-120416079 retained_intron
ENSG00000248318 (RP11-713M15.1)
 ENST00000509350 (RP11-713M15.1-001) 120761253-120776832 antisense
ENSG00000250290 (CTC-820M8.1)
 ENST00000505112 (CTC-820M8.1-001) 120635558-120638204 processed_pseudogene
ENSG00000272502 (RP11-713M15.2)
 ENST00000605955 (RP11-713M15.2-001) 120812219-120813359 antisense
CIL_0002GD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022369-ENSMUSG00000060429 CGP 10090 15:55557408-55906949
GeneTranscriptPositionBiotype
ENSMUSG00000022369 (Mtbp)
Mdm2, transformed 3T3 cell double minute p53 binding protein 		ENSMUST00000022998 (Mtbp-001) 55557408-55626423 protein_coding
ENSMUST00000166449 (Mtbp-006) 55621452-55626421 processed_transcript
ENSMUST00000169517 (Mtbp-004) 55557735-55569077 nonsense_mediated_decay
ENSMUST00000169667 (Mtbp-003) 55576780-55626422 protein_coding
ENSMUST00000170046 (Mtbp-002) 55557595-55610813 protein_coding
ENSMUST00000171146 (Mtbp-005) 55617587-55619938 retained_intron
ENSMUSG00000060429 (Sntb1)
syntrophin, basic 1 		ENSMUST00000039769 (Sntb1-001) 55638843-55906949 protein_coding
ENSMUST00000110200 (Sntb1-002) 55790964-55906722 protein_coding
ENSMUST00000140574 (Sntb1-003) 55791938-55906310 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GD_0001ENSDARG00000041729ENSDART00000061164ENSDART00000125691ENSDARG00000090447ENSDART00000129251CIL_0002GD_0002ENSG00000172164ENST00000395601ENST00000517992ENST00000519177ENST00000519298ENST00000520717ENSG00000172167ENST00000305949ENST00000456899ENST00000519188ENST00000519556ENST00000519841ENST00000522308ENST00000522449ENST00000523373ENSG00000172172ENST00000306185ENST00000518696ENST00000518918ENST00000520677ENST00000521648ENST00000522717ENST00000613356ENSG00000248318ENST00000509350ENSG00000250290ENST00000505112ENSG00000272502ENST00000605955CIL_0002GD_0003ENSMUSG00000022369ENSMUST00000022998ENSMUST00000166449ENSMUST00000169517ENSMUST00000169667ENSMUST00000170046ENSMUST00000171146ENSMUSG00000060429ENSMUST00000039769ENSMUST00000110200ENSMUST00000140574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002GD_0001ENSDARG00000041729ENSDART00000061164ENSDART00000125691ENSDARG00000090447ENSDART00000129251CIL_0002GD_0002ENSG00000172164ENST00000395601ENST00000517992ENSG00000172167ENST00000305949ENSG00000172172ENST00000306185ENST00000518918ENSG00000248318ENST00000509350ENSG00000250290ENST00000505112ENSG00000272502ENST00000605955CIL_0002GD_0003ENSMUSG00000022369ENSMUST00000022998ENSMUST00000170046ENSMUST00000171146ENSMUSG00000060429ENSMUST00000039769ENSMUST00000140574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041729 ENSDART00000061164 N/A N/A N/A 2.048±0.34 N/A N/A 11.309±2.90 5.563±0.93 0.309±0.00 N/A 1.409±0.00 N/A N/A N/A
ENSDART00000125691 N/A N/A N/A 0.835±0.00 N/A N/A 3.498±0.00 N/A N/A N/A 0.262±0.00 N/A N/A N/A
ENSDARG00000090447 ENSDART00000129251 N/A N/A N/A 0.903±0.34 N/A N/A 0.564±0.17 3.412±0.56 0.272±0.00 N/A 0.297±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172164 ENST00000395601 N/A N/A N/A 1.032±0.56 N/A N/A 0.610±0.00 6.567±0.00 25.569±0.00 N/A N/A N/A N/A N/A
ENST00000517992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.976±0.00 2.199±0.00 2.664±0.00
ENST00000519177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172167 ENST00000305949 N/A N/A N/A N/A 1.554±0.00 N/A N/A N/A N/A N/A N/A 2.391±1.13 0.805±0.00 2.540±0.00
ENST00000456899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172172 ENST00000306185 7.987±0.00 12.994±0.00 3.667±0.00 6.321±0.62 6.026±0.79 10.250±1.34 6.155±1.79 15.094±4.62 4.834±0.00 8.178±0.00 6.389±0.63 19.339±5.98 9.998±2.07 10.525±3.16
ENST00000518696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518918 N/A N/A N/A N/A 8.182±0.00 N/A 9.147±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000520677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248318 ENST00000509350 0.020±0.00 0.027±0.00 0.026±0.00 0.028±0.00 N/A N/A 0.022±0.01 0.020±0.00 0.058±0.00 N/A N/A 0.016±0.00 0.020±0.00 0.513±0.06
ENSG00000250290 ENST00000505112 N/A 0.011±0.00 0.023±0.00 N/A 0.358±0.00 0.050±0.00 0.025±0.02 0.228±0.21 0.031±0.01 0.162±0.00 N/A 0.609±0.63 0.037±0.02 0.076±0.07
ENSG00000272502 ENST00000605955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.227±0.52
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022369 ENSMUST00000022998 0.643±0.01 0.435±0.14 1.941±0.25 3.217±0.94 0.828±0.34 0.701±0.26 N/A 1.087±0.13 7.714±3.10 1.395±0.00 N/A 1.923±1.26 3.518±1.75 4.449±1.33
ENSMUST00000166449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170046 1.252±0.00 0.274±0.00 N/A N/A 0.469±0.00 0.620±0.12 N/A N/A N/A N/A N/A 0.751±0.32 N/A 3.136±0.24
ENSMUST00000171146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.786±0.00
ENSMUSG00000060429 ENSMUST00000039769 6.773±1.89 8.122±2.35 0.686±0.00 0.641±0.51 4.958±1.14 0.737±0.11 0.791±0.09 1.292±0.55 4.302±1.91 4.550±1.89 0.655±0.14 2.254±0.93 2.445±0.00 0.091±0.05
ENSMUST00000110200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140574 N/A N/A N/A N/A N/A 0.792±0.00 N/A N/A N/A N/A N/A N/A N/A 0.206±0.07

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