C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD1 homolog (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170100 Rad1-006 ENSMUSG00000022248 10090 + 15:10486609-10493674 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000170100
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000170100 1.389±0.00 0.849±0.00 3.560±0.77 2.050±0.37 0.653±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000077 IEA DNA damage checkpoint
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231383 RAD1P1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000325577 RAD1-002 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000341754 RAD1-003 protein_coding Homo_sapiens 0 754
ENST00000382038 RAD1-001 protein_coding Homo_sapiens 0 754
ENST00000513914 RAD1-005 nonsense_mediated_decay Homo_sapiens 0 627

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