C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptonemal complex central element protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170296 Syce2-201 ENSMUSG00000003824 10090 + 8:84872111-84887446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170296
Transcript ID Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170296 0.290±0.08 0.624±0.00 0.144±0.00 0.107±0.04 0.368±0.00 4.029±2.45 0.247±0.05 0.182±0.04 2.913±0.37 9.923±5.94 40.731±35.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZV CIL_0007ZV_0002 VISTA 8:84428902-85032705
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230
CIL_0006LV CIL_0006LV_0002 CGP 8:84856989-84888221
CIL_00076Z CIL_00076Z_0002 CGP 8:84872111-84893921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 ISS synaptonemal complex
GO:0000801 IDA central element
GO:0005515 IPI protein binding
GO:0007130 IC synaptonemal complex assembly

Homologs

No Homologs available.

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