C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD1 homolog (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170531 Rad1-002 ENSMUSG00000022248 10090 + 15:10486049-10493684 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungMuscleOvaryPlacentaENSMUST00000170531
Transcript ID Brain Breast Colon Liver Lung Muscle Ovary Placenta
ENSMUST00000170531 0.533±0.38 0.509±0.00 0.305±0.03 1.068±0.06 0.312±0.00 0.108±0.00 0.344±0.12 0.102±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231383 RAD1P1-001 processed_pseudogene Homo_sapiens 0 497
ENST00000325577 RAD1-002 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000341754 RAD1-003 protein_coding Homo_sapiens 0 640
ENST00000382038 RAD1-001 protein_coding Homo_sapiens 0 640
ENST00000506311 RAD1-004 retained_intron Homo_sapiens 0 213
ENST00000511456 RAD1-006 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000513914 RAD1-005 nonsense_mediated_decay Homo_sapiens 0 435

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