C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170796 Nob1-004 ENSMUSG00000003848 10090 - 8:107412486-107421562 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000170796
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000170796 0.990±0.00 4.289±0.13 4.977±1.12 8.004±2.81 3.338±0.35 3.146±0.00 1.516±0.43 1.672±0.16 3.007±1.92 1.517±0.27 4.501±1.20 3.926±1.70 1.331±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0002 VISTA 8:107038845-107639359
CIL_00090U CIL_00090U_0002 VISTA 8:107303123-107903792
CIL_0004I2 CIL_0004I2_0002 CGP 8:107388225-107425051
CIL_0001NB CIL_0001NB_0002 CGP 8:107412486-107558594

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268802 NOB1-001 protein_coding Homo_sapiens 0 501
ENST00000502915 RP11-173E2.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000564620 NOB1-006 nonsense_mediated_decay Homo_sapiens 2e-23 113
ENST00000569871 NOB1-003 nonsense_mediated_decay Homo_sapiens 4.00001e-41 172

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