C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 3C (BRIGHT-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171251 Arid3c-201 ENSMUSG00000066224 10090 - 4:41723836-41731142 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000171251
Transcript ID Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000171251 0.419±0.00 0.199±0.04 0.016±0.00 0.030±0.00 0.007±0.00 0.032±0.00 0.076±0.02 0.045±0.04 0.100±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GW CIL_0003GW_0002 CGP 4:41714798-41731142
CIL_0005SN CIL_0005SN_0002 CGP 4:41723836-41756157

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0045121 IEA membrane raft
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378909 ARID3C-002 protein_coding Homo_sapiens 0 1293

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