C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171461 Rnf14-203 ENSMUSG00000060450 10090 + 18:38296805-38317847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryTestisENSMUST00000171461
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary Testis
ENSMUST00000171461 2.511±0.00 8.523±2.37 3.828±1.43 2.697±0.68 3.538±0.98 2.707±0.49 4.488±0.89 3.118±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QG CIL_0006QG_0002 CGP 18:38267092-38317847
CIL_0006Q5 CIL_0006Q5_0002 CGP 18:38296635-38339003

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0019787 ISS small conjugating protein ligase activity
GO:0032355 IEA response to estradiol
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0050681 ISS androgen receptor binding
GO:0060765 ISS regulation of androgen receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347642 RNF14-201 protein_coding Homo_sapiens 0 1674
ENST00000356143 RNF14-202 protein_coding Homo_sapiens 0 1674
ENST00000394514 RNF14-002 protein_coding Homo_sapiens 0 1216
ENST00000394519 RNF14-203 protein_coding Homo_sapiens 0 1731
ENST00000394520 RNF14-001 protein_coding Homo_sapiens 0 1731
ENST00000427150 AC097721.1-001 processed_pseudogene Homo_sapiens 0 887
ENST00000427378 AC083862.6-001 processed_pseudogene Homo_sapiens 0 1074
ENST00000442161 AC004893.10-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000502341 RNF14-009 processed_transcript Homo_sapiens 0 549
ENST00000506822 RNF14-004 protein_coding Homo_sapiens 0 636
ENST00000506938 RNF14-010 protein_coding Homo_sapiens 0 689
ENST00000507163 RNF14-006 protein_coding Homo_sapiens 0 795
ENST00000511961 RNF14-003 protein_coding Homo_sapiens 0 1083
ENST00000513019 RNF14-005 protein_coding Homo_sapiens 0 501
ENST00000515613 RNF14-012 nonsense_mediated_decay Homo_sapiens 0 418

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