C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | slit homolog 1 (Drosophila) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000171586  |
Slit1-003 |
ENSMUSG00000025020 |
10090 | - |
19:41646103-41743486  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008SO | CIL_0008SO_0002 | VISTA | 19:41258217-41859329 |
| CIL_0003F3 | CIL_0003F3_0002 | CGP | 19:41600257-41802084 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005102 | TAS | receptor binding |
| GO:0005615 | IDA | extracellular space |
| GO:0007409 | IDA | axonogenesis |
| GO:0007411 | IGI | axon guidance |
| GO:0021772 | IGI | olfactory bulb development |
| GO:0022028 | IMP | tangential migration from the subventricular zone to the olfactory bulb |
| GO:0022029 | IGI | telencephalon cell migration |
| GO:0031290 | IGI | retinal ganglion cell axon guidance |
| GO:0033563 | IGI | dorsal/ventral axon guidance |
| GO:0040023 | IDA | establishment of nucleus localization |
| GO:0048495 | IPI | Roundabout binding |
| GO:0048812 | IGI | neuron projection morphogenesis |
| GO:0050919 | IMP | negative chemotaxis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000266058
|
SLIT1-001 | protein_coding | Homo_sapiens | 0 | 952 |
|
ENST00000314867
|
SLIT1-006 | protein_coding | Homo_sapiens | 0 | 407 |
|
ENST00000371041
|
SLIT1-004 | protein_coding | Homo_sapiens | 0 | 518 |
|
ENST00000371070
|
SLIT1-003 | protein_coding | Homo_sapiens | 0 | 952 |
|
ENST00000456008
|
SLIT1-009 | processed_transcript | Homo_sapiens | 0 | 518 |
