C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171634 Plec-011 ENSMUSG00000022565 10090 - 15:76186611-76206321 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_0002GS CIL_0002GS_0002 CGP 15:76170974-76243441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0030056 ISS hemidesmosome
GO:0031581 ISS hemidesmosome assembly
GO:0042383 ISS sarcolemma
GO:0043292 IDA contractile fiber

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322810 PLEC-001 protein_coding Homo_sapiens 0 3107
ENST00000345136 PLEC-004 protein_coding Homo_sapiens 0 2573
ENST00000354589 PLEC-005 protein_coding Homo_sapiens 0 2573
ENST00000354958 PLEC-008 protein_coding Homo_sapiens 0 2573
ENST00000356346 PLEC-009 protein_coding Homo_sapiens 0 2573
ENST00000357649 PLEC-006 protein_coding Homo_sapiens 0 2573
ENST00000361689 MACF1-001 protein_coding Homo_sapiens 0 230
ENST00000372915 MACF1-028 protein_coding Homo_sapiens 0 230
ENST00000398774 PLEC-007 protein_coding Homo_sapiens 0 2571
ENST00000436759 PLEC-002 protein_coding Homo_sapiens 0 2575
ENST00000467673 MACF1-013 retained_intron Homo_sapiens 2e-34 150
ENST00000469366 MACF1-015 processed_transcript Homo_sapiens 4e-34 148
ENST00000480624 MACF1-014 processed_transcript Homo_sapiens 0 206
ENST00000494012 MACF1-016 protein_coding Homo_sapiens 4e-35 152
ENST00000524432 MACF1-030 protein_coding Homo_sapiens 0 231
ENST00000526416 PLEC-015 protein_coding Homo_sapiens 0 628
ENST00000527096 PLEC-003 protein_coding Homo_sapiens 0 2519
ENST00000527816 PLEC-014 protein_coding Homo_sapiens 0 520
ENST00000528025 PLEC-010 protein_coding Homo_sapiens 0 1919
ENST00000528131 PLEC-013 protein_coding Homo_sapiens 0 442
ENST00000532346 PLEC-012 retained_intron Homo_sapiens 1e-37 159
ENST00000564288 MACF1-032 protein_coding Homo_sapiens 1e-34 156
ENST00000567887 MACF1-031 protein_coding Homo_sapiens 1e-34 156

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