C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528025 PLEC-010 ENSG00000178209 9606 - 8:143932400-143975375 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FZ CIL_0006FZ_0002 CGP 8:143857324-143976734
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_0002GS CIL_0002GS_0001 CGP 8:143915147-144012772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089610 Plec-205 protein_coding Mus_musculus 0 2362
ENSMUST00000167754 Plec-007 protein_coding Mus_musculus 0 2362
ENSMUST00000166428 Plec-008 protein_coding Mus_musculus 0 2287
ENSMUST00000080857 Plec-204 protein_coding Mus_musculus 0 2185
ENSMUST00000169289 Plec-010 protein_coding Mus_musculus 0 2185
ENSMUST00000071869 Plec-202 protein_coding Mus_musculus 0 1919
ENSMUST00000073418 Plec-203 protein_coding Mus_musculus 0 1919
ENSMUST00000054449 Plec-201 protein_coding Mus_musculus 0 1919
ENSMUST00000165453 Plec-014 protein_coding Mus_musculus 0 1919
ENSMUST00000171634 Plec-011 protein_coding Mus_musculus 0 1919
ENSMUST00000171562 Plec-016 protein_coding Mus_musculus 0 1919
ENSMUST00000076442 Plec-002 protein_coding Mus_musculus 0 1919
ENSMUST00000169108 Plec-013 protein_coding Mus_musculus 0 1919
ENSMUST00000169714 Plec-005 protein_coding Mus_musculus 0 1919
ENSMUST00000169438 Plec-006 protein_coding Mus_musculus 0 1919
ENSMUST00000072692 Plec-003 protein_coding Mus_musculus 0 1919
ENSMUST00000023226 Plec-004 protein_coding Mus_musculus 0 1919
ENSMUST00000074834 Plec-001 protein_coding Mus_musculus 0 1919
ENSDART00000014024 plecb-201 protein_coding Danio_rerio 0 913
ENSDART00000144558 plecb-001 protein_coding Danio_rerio 0 913
ENSMUST00000165135 Plec-017 retained_intron Mus_musculus 5.99756e-43 180
ENSMUST00000170226 Parp10-002 nonsense_mediated_decay Mus_musculus 5.99756e-43 180
ENSMUST00000172269 Sptbn4-201 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000152572 Sptbn4-002 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000011895 Sptbn4-001 protein_coding Mus_musculus 0.00000002 66
ENSMUST00000138087 Sptbn4-007 processed_transcript Mus_musculus 0.00000006 64
ENSMUST00000008991 Sptbn2-201 protein_coding Mus_musculus 0.0000002 62

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