C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plectin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526416 PLEC-015 ENSG00000178209 9606 - 8:143935277-143946405 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FZ CIL_0006FZ_0002 CGP 8:143857324-143976734
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_0002GS CIL_0002GS_0001 CGP 8:143915147-144012772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171562 Plec-016 protein_coding Mus_musculus 0 693
ENSMUST00000169714 Plec-005 protein_coding Mus_musculus 0 693
ENSMUST00000071869 Plec-202 protein_coding Mus_musculus 0 691
ENSMUST00000076442 Plec-002 protein_coding Mus_musculus 0 691
ENSMUST00000023226 Plec-004 protein_coding Mus_musculus 0 691
ENSMUST00000074834 Plec-001 protein_coding Mus_musculus 0 691
ENSMUST00000072692 Plec-003 protein_coding Mus_musculus 0 689
ENSMUST00000169108 Plec-013 protein_coding Mus_musculus 0 688
ENSMUST00000169438 Plec-006 protein_coding Mus_musculus 0 688
ENSMUST00000073418 Plec-203 protein_coding Mus_musculus 0 628
ENSMUST00000054449 Plec-201 protein_coding Mus_musculus 0 628
ENSMUST00000165453 Plec-014 protein_coding Mus_musculus 0 628
ENSMUST00000171634 Plec-011 protein_coding Mus_musculus 0 628
ENSMUST00000089610 Plec-205 protein_coding Mus_musculus 2e-37 159
ENSMUST00000166428 Plec-008 protein_coding Mus_musculus 2e-37 159
ENSMUST00000167754 Plec-007 protein_coding Mus_musculus 2e-37 159
ENSMUST00000080857 Plec-204 protein_coding Mus_musculus 8e-37 158
ENSMUST00000169289 Plec-010 protein_coding Mus_musculus 8e-37 158
ENSMUST00000172269 Sptbn4-201 protein_coding Mus_musculus 0.00000006 62
ENSMUST00000152572 Sptbn4-002 protein_coding Mus_musculus 0.00000006 62
ENSMUST00000138087 Sptbn4-007 processed_transcript Mus_musculus 0.00000006 62
ENSMUST00000011895 Sptbn4-001 protein_coding Mus_musculus 0.00000006 62
ENSMUST00000008991 Sptbn2-201 protein_coding Mus_musculus 0.0000008 58

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