C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 1a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171651 Slco1a1-003 ENSMUSG00000041698 10090 - 6:141922774-141946816 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverOvaryTestisENSMUST00000171651
Transcript ID Adipose Breast Kidney Liver Ovary Testis
ENSMUST00000171651 0.030±0.00 0.096±0.03 0.019±0.00 0.003±0.00 0.198±0.10 0.022±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307378 SLCO1A2-001 protein_coding Homo_sapiens 0 693
ENST00000421287 SLCO1A2-013 protein_coding Homo_sapiens 9e-32 141
ENST00000421294 SLCO1A2-011 protein_coding Homo_sapiens 0 281
ENST00000422327 SLCO1A2-012 protein_coding Homo_sapiens 0 377
ENST00000435179 SLCO1A2-007 protein_coding Homo_sapiens 0 246
ENST00000445053 SLCO1A2-005 protein_coding Homo_sapiens 6e-38 161
ENST00000450590 SLCO1A2-010 protein_coding Homo_sapiens 0 252
ENST00000453443 SLCO1A2-009 protein_coding Homo_sapiens 0 357
ENST00000463718 SLCO1A2-003 retained_intron Homo_sapiens 0 656
ENST00000473830 SLCO1A2-006 processed_transcript Homo_sapiens 9.99967e-42 174
ENST00000480394 SLCO1A2-004 retained_intron Homo_sapiens 0 654
ENST00000544020 SLCO1A2-016 nonsense_mediated_decay Homo_sapiens 4e-30 137
ENST00000544290 SLCO1A2-017 nonsense_mediated_decay Homo_sapiens 3.00004e-41 174

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