C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroglobulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172153 Tg-005 ENSMUSG00000053469 10090 + 15:66736250-66850721 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLungOvaryPlacentaTestisENSMUST00000172153
Transcript ID Adipose Adrenal Bladder Brain Breast Lung Ovary Placenta Testis
ENSMUST00000172153 0.034±0.00 0.065±0.03 0.028±0.00 0.023±0.02 0.154±0.07 0.267±0.00 0.263±0.18 0.099±0.05 0.480±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009D4 CIL_0009D4_0002 VISTA 15:66524301-67127162
CIL_0004PY CIL_0004PY_0002 CGP 15:66577572-66850721
CIL_0004PV CIL_0004PV_0002 CGP 15:66670753-66850721

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220616 TG-001 protein_coding Homo_sapiens 0 1541
ENST00000519178 TG-003 protein_coding Homo_sapiens 0 1541
ENST00000519543 TG-005 protein_coding Homo_sapiens 0 2080
ENST00000521107 TG-007 protein_coding Homo_sapiens 0 220
ENST00000522809 TG-008 retained_intron Homo_sapiens 0 411
ENST00000522996 TG-009 retained_intron Homo_sapiens 0 355
ENST00000523756 TG-002 nonsense_mediated_decay Homo_sapiens 0 1541

Loading