C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 152
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172299 Rnf152-201 ENSMUSG00000047496 10090 - 1:105276917-105356710 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172299 0.353±0.09 0.250±0.00 0.655±0.16 1.823±0.71 0.224±0.18 0.733±0.24 0.148±0.03 0.858±0.20 0.503±0.35 0.285±0.06 0.101±0.04 1.037±0.44 0.046±0.02 0.140±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0002 CGP 1:104768529-105356710
CIL_0007FF CIL_0007FF_0002 CGP 1:105276914-105663677

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005764 ISS lysosome
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312828 RNF152-001 protein_coding Homo_sapiens 0 952
ENST00000397754 RNF152P1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000591306 RNF152-004 protein_coding Homo_sapiens 0 392

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