C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172387 Mrpl13-001 ENSMUSG00000022370 10090 - 15:55534094-55557748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172387
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172387 9.547±0.63 0.967±0.35 22.133±2.72 12.961±3.19 4.349±2.64 3.587±0.97 14.478±1.86 11.153±1.69 22.183±16.73 4.844±0.97 19.266±1.03 7.466±7.54 18.454±6.90 9.951±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009J CIL_00009J_0003 CGP 15:55307750-55557748
CIL_00008U CIL_00008U_0003 CGP 15:55534094-55626423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005761 ISS mitochondrial ribosome
GO:0005762 ISO mitochondrial large ribosomal subunit
GO:0006412 IEA translation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306185 MRPL13-001 protein_coding Homo_sapiens 0 621
ENST00000518696 MRPL13-003 nonsense_mediated_decay Homo_sapiens 1.99993e-41 174
ENST00000518918 MRPL13-005 protein_coding Homo_sapiens 0 562
ENST00000520677 MRPL13-004 retained_intron Homo_sapiens 6.00036e-42 174

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