C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific methyltransferase 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172556 Kmt2c-008 ENSMUSG00000038056 10090 - 5:25272426-25308550 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172556 3.832±0.75 4.189±0.84 3.443±0.10 6.235±2.86 5.556±0.65 4.627±0.32 2.312±0.44 3.053±0.40 1.540±0.42 5.090±0.61 1.138±0.00 4.438±1.00 2.779±0.52 1.661±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_00027A CIL_00027A_0002 CGP 5:25222882-25498783

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137010 kmt2ca-001 protein_coding Danio_rerio 5e-23 115
ENST00000262189 KMT2C-001 protein_coding Homo_sapiens 0 5036
ENST00000355193 KMT2C-201 protein_coding Homo_sapiens 0 5036
ENST00000360104 KMT2C-009 protein_coding Homo_sapiens 0 3644
ENST00000418061 KMT2C-015 protein_coding Homo_sapiens 0 857
ENST00000424877 KMT2C-010 protein_coding Homo_sapiens 0 4966
ENST00000473186 KMT2C-002 retained_intron Homo_sapiens 0 3954
ENST00000485241 KMT2C-016 processed_transcript Homo_sapiens 0 460
ENST00000558084 KMT2C-018 nonsense_mediated_decay Homo_sapiens 0 5036

Loading