C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific methyltransferase 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355193 KMT2C-201 ENSG00000055609 9606 - 7:152134929-152436005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000355193
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000355193 0.559±0.00 1.244±0.00 2.218±0.00 5.946±0.00 0.695±0.00 0.577±0.00 2.909±0.00 1.699±0.85 1.224±0.94 0.317±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027A CIL_00027A_0001 CGP 7:152025674-152436005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0035097 IDA histone methyltransferase complex
GO:0035556 IEA intracellular signal transduction
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0044822 IDA poly(A) RNA binding
GO:0051568 IDA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045291 Kmt2c-001 protein_coding Mus_musculus 0 16110
ENSMUST00000174734 Kmt2c-006 protein_coding Mus_musculus 0 5854
ENSMUST00000172556 Kmt2c-008 protein_coding Mus_musculus 0 5036
ENSMUST00000173073 Kmt2c-007 protein_coding Mus_musculus 0 2889
ENSMUST00000173174 Kmt2c-003 protein_coding Mus_musculus 0 2793
ENSMUST00000172626 Kmt2c-005 retained_intron Mus_musculus 0 2050
ENSMUST00000173673 Kmt2c-010 retained_intron Mus_musculus 0 909
ENSMUST00000172707 Kmt2c-009 retained_intron Mus_musculus 0 351
ENSDART00000137010 kmt2ca-001 protein_coding Danio_rerio 5e-27 130

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