C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18284
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172604 Gm18284-001 ENSMUSG00000092325 10090 - 15:81674255-81674878 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172604 0.191±0.11 0.349±0.14 0.425±0.05 0.331±0.19 0.366±0.20 0.417±0.11 0.337±0.20 0.413±0.21 0.264±0.22 0.392±0.20 0.192±0.13 0.566±0.34 0.316±0.17 0.374±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0002 CGP 15:81585351-81688315
CIL_0000VA CIL_0000VA_0003 CGP 15:81663889-81697287

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294613 TM2D1-201 protein_coding Homo_sapiens 0 612
ENST00000371178 TM2D1-008 retained_intron Homo_sapiens 0 464
ENST00000371180 TM2D1-001 protein_coding Homo_sapiens 0 612
ENST00000468586 TM2D1-005 nonsense_mediated_decay Homo_sapiens 0 424
ENST00000472357 TM2D1-010 retained_intron Homo_sapiens 5e-35 152
ENST00000472989 TM2D1-011 processed_transcript Homo_sapiens 0 455
ENST00000488206 TM2D1-003 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000488410 TM2D1-006 processed_transcript Homo_sapiens 3e-35 152
ENST00000494926 TM2D1-004 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000496465 TM2D1-002 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000606498 TM2D1-012 protein_coding Homo_sapiens 0 612

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