C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired box 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172866 Pax5-016 ENSMUSG00000014030 10090 - 4:44531497-44710408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungPlacentaENSMUST00000172866
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Placenta
ENSMUST00000172866 0.052±0.00 0.161±0.00 6.627±2.00 0.590±0.44 0.201±0.13 0.183±0.09 1.109±0.21 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K6 CIL_0006K6_0002 CGP 4:44300876-44710487
CIL_000843 CIL_000843_0002 VISTA 4:44530265-45131018
CIL_0006K7 CIL_0006K7_0002 CGP 4:44531145-44932215

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358127 PAX5-001 protein_coding Homo_sapiens 0 1334
ENST00000377840 PAX5-002 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000377847 PAX5-012 protein_coding Homo_sapiens 0 961
ENST00000377852 PAX5-003 protein_coding Homo_sapiens 0 959
ENST00000377853 PAX5-004 protein_coding Homo_sapiens 0 1125
ENST00000414447 PAX5-013 protein_coding Homo_sapiens 0 791
ENST00000446742 PAX5-008 protein_coding Homo_sapiens 0 671
ENST00000520154 PAX5-007 protein_coding Homo_sapiens 0 806
ENST00000520281 PAX5-005 protein_coding Homo_sapiens 0 582
ENST00000522003 PAX5-009 protein_coding Homo_sapiens 0 1402
ENST00000523145 PAX5-010 protein_coding Homo_sapiens 0 1029
ENST00000523241 PAX5-006 protein_coding Homo_sapiens 0 806
ENST00000523493 PAX5-011 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000524340 PAX5-014 protein_coding Homo_sapiens 0 531

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