C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006K6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165304-ENSG00000196092 CGP 9606 9:36572862-37034185
GeneTranscriptPositionBiotype
ENSG00000165304 (MELK)
maternal embryonic leucine zipper kinase 		ENST00000298048 (MELK-001) 36572862-36677682 protein_coding
ENST00000480021 (MELK-004) 36630007-36633200 processed_transcript
ENST00000487398 (MELK-002) 36572924-36630367 processed_transcript
ENST00000489766 (MELK-003) 36572897-36607622 processed_transcript
ENST00000495529 (MELK-005) 36572897-36633155 processed_transcript
ENST00000536329 (MELK-201) 36572862-36677683 protein_coding
ENST00000536860 (MELK-202) 36572862-36677683 protein_coding
ENST00000536987 (MELK-203) 36572862-36677683 protein_coding
ENST00000541717 (MELK-204) 36572862-36677683 protein_coding
ENST00000543751 (MELK-205) 36572862-36677683 protein_coding
ENST00000545008 (MELK-206) 36572862-36677683 protein_coding
ENSG00000196092 (PAX5)
paired box 5 		ENST00000358127 (PAX5-001) 36833275-37034185 protein_coding
ENST00000377840 (PAX5-002) 36840172-37034041 nonsense_mediated_decay
ENST00000377847 (PAX5-012) 36840551-37034031 protein_coding
ENST00000377852 (PAX5-003) 36840172-37034041 protein_coding
ENST00000377853 (PAX5-004) 36840172-37034041 protein_coding
ENST00000414447 (PAX5-013) 36840551-37034031 protein_coding
ENST00000446742 (PAX5-008) 36840551-37034031 protein_coding
ENST00000520083 (PAX5-016) 36922694-36966589 retained_intron
ENST00000520154 (PAX5-007) 36840172-37034041 protein_coding
ENST00000520281 (PAX5-005) 36840551-37034031 protein_coding
ENST00000522003 (PAX5-009) 36840551-37034031 protein_coding
ENST00000522932 (PAX5-015) 36840558-37002752 protein_coding
ENST00000523145 (PAX5-010) 36840551-37034031 protein_coding
ENST00000523241 (PAX5-006) 36840172-37034041 protein_coding
ENST00000523493 (PAX5-011) 36840551-37034031 nonsense_mediated_decay
ENST00000524340 (PAX5-014) 36840558-37002675 protein_coding
ENSG00000250850 (RP11-297B17.3)
 ENST00000509911 (RP11-297B17.3-001) 37002697-37008040 antisense
CIL_0006K6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035683-ENSMUSG00000014030 CGP 10090 4:44300876-44710487
GeneTranscriptPositionBiotype
ENSMUSG00000014030 (Pax5)
paired box 5 		ENSMUST00000014174 (Pax5-001) 44531145-44710487 protein_coding
ENSMUST00000102932 (Pax5-004) 44531145-44710418 protein_coding
ENSMUST00000107825 (Pax5-003) 44531145-44710418 protein_coding
ENSMUST00000107826 (Pax5-006) 44531145-44710418 protein_coding
ENSMUST00000107827 (Pax5-005) 44531145-44710418 protein_coding
ENSMUST00000134968 (Pax5-010) 44531497-44710408 protein_coding
ENSMUST00000143235 (Pax5-002) 44531145-44710418 nonsense_mediated_decay
ENSMUST00000146335 (Pax5-007) 44679440-44704006 protein_coding
ENSMUST00000165417 (Pax5-009) 44531497-44710408 protein_coding
ENSMUST00000172866 (Pax5-016) 44531497-44710408 protein_coding
ENSMUST00000172949 (Pax5-008) 44569971-44683815 processed_transcript
ENSMUST00000173733 (Pax5-014) 44531497-44710408 protein_coding
ENSMUST00000173821 (Pax5-011) 44531497-44710408 protein_coding
ENSMUST00000174242 (Pax5-013) 44531497-44710408 nonsense_mediated_decay
ENSMUST00000174319 (Pax5-012) 44531497-44710408 protein_coding
ENSMUST00000174761 (Pax5-017) 44679454-44703413 processed_transcript
ENSMUST00000186542 (Pax5-019) 44679454-44703413 protein_coding
ENSMUST00000187197 (Pax5-015) 44679454-44703413 processed_transcript
ENSMUST00000191036 (Pax5-018) 44679454-44703413 processed_transcript
ENSMUSG00000035683 (Melk)
maternal embryonic leucine zipper kinase 		ENSMUST00000045607 (Melk-001) 44300876-44364675 protein_coding
ENSMUST00000125708 (Melk-003) 44303568-44318070 protein_coding
ENSMUST00000137703 (Melk-002) 44302667-44325693 protein_coding
ENSMUST00000137759 (Melk-004) 44303568-44324268 processed_transcript
ENSMUSG00000081127 (Gm12677)
predicted gene 12677 		ENSMUST00000118668 (Gm12677-001) 44313427-44314058 processed_pseudogene
ENSMUSG00000083803 (Gm12455)
predicted gene 12455 		ENSMUST00000121242 (Gm12455-001) 44382922-44383337 processed_pseudogene
ENSMUSG00000086211 (Gm12462)
predicted gene 12462 		ENSMUST00000140826 (Gm12462-001) 44664415-44685347 antisense
ENSMUSG00000099065 (Gm19980)
predicted gene, 19980 		ENSMUST00000183843 (Gm19980-001) 44524757-44529159 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006K6_0001ENSG00000165304ENST00000298048ENST00000480021ENST00000487398ENST00000489766ENST00000495529ENST00000536329ENST00000536860ENST00000536987ENST00000541717ENST00000543751ENST00000545008ENSG00000196092ENST00000358127ENST00000377840ENST00000377847ENST00000377852ENST00000377853ENST00000414447ENST00000446742ENST00000520083ENST00000520154ENST00000520281ENST00000522003ENST00000522932ENST00000523145ENST00000523241ENST00000523493ENST00000524340ENSG00000250850ENST00000509911CIL_0006K6_0002ENSMUSG00000014030ENSMUST00000014174ENSMUST00000102932ENSMUST00000107825ENSMUST00000107826ENSMUST00000107827ENSMUST00000134968ENSMUST00000143235ENSMUST00000146335ENSMUST00000165417ENSMUST00000172866ENSMUST00000172949ENSMUST00000173733ENSMUST00000173821ENSMUST00000174242ENSMUST00000174319ENSMUST00000174761ENSMUST00000186542ENSMUST00000187197ENSMUST00000191036ENSMUSG00000035683ENSMUST00000045607ENSMUST00000125708ENSMUST00000137703ENSMUST00000137759ENSMUSG00000081127ENSMUST00000118668ENSMUSG00000083803ENSMUST00000121242ENSMUSG00000086211ENSMUST00000140826ENSMUSG00000099065ENSMUST00000183843
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006K6_0001ENSG00000165304ENST00000298048ENST00000480021ENST00000487398ENST00000489766ENST00000536329ENST00000536860ENST00000536987ENST00000541717ENST00000543751ENST00000545008ENSG00000196092ENST00000358127ENST00000446742ENST00000520083ENST00000520154ENST00000520281ENST00000523145ENSG00000250850ENST00000509911CIL_0006K6_0002ENSMUSG00000014030ENSMUST00000014174ENSMUST00000102932ENSMUST00000107825ENSMUST00000107826ENSMUST00000107827ENSMUST00000134968ENSMUST00000143235ENSMUST00000146335ENSMUST00000165417ENSMUST00000172866ENSMUST00000172949ENSMUST00000173733ENSMUST00000173821ENSMUST00000174242ENSMUST00000187197ENSMUST00000191036ENSMUSG00000035683ENSMUST00000045607ENSMUST00000125708ENSMUST00000137759ENSMUSG00000081127ENSMUST00000118668ENSMUSG00000083803ENSMUST00000121242ENSMUSG00000086211ENSMUST00000140826ENSMUSG00000099065ENSMUST00000183843
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165304 ENST00000298048 N/A N/A N/A N/A 0.282±0.00 N/A 0.123±0.00 0.116±0.00 N/A N/A N/A 0.446±0.00 0.698±0.29 N/A
ENST00000480021 N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A
ENST00000487398 N/A N/A N/A N/A N/A 1.433±0.00 N/A N/A 0.075±0.00 0.073±0.00 N/A N/A N/A N/A
ENST00000489766 N/A N/A N/A N/A 1.139±0.00 N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A N/A
ENST00000495529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536329 N/A N/A N/A N/A 0.230±0.00 N/A N/A 0.022±0.00 N/A 0.125±0.00 N/A N/A N/A N/A
ENST00000536860 N/A N/A N/A N/A 0.896±0.00 N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A 1.811±0.00
ENST00000536987 N/A N/A 0.122±0.00 N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A 0.525±0.00 0.537±0.05 N/A
ENST00000541717 N/A N/A N/A N/A N/A 0.947±0.00 N/A N/A 0.088±0.00 N/A N/A N/A 0.347±0.01 N/A
ENST00000543751 N/A N/A N/A N/A 0.306±0.00 N/A N/A N/A N/A N/A N/A 2.630±2.89 1.168±0.78 N/A
ENST00000545008 0.094±0.00 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A 2.041±0.00 0.437±0.00
ENSG00000196092 ENST00000358127 0.012±0.00 11.589±0.00 N/A 0.004±0.00 N/A 0.014±0.00 0.018±0.01 0.018±0.00 0.007±0.00 N/A 0.003±0.00 0.005±0.00 0.031±0.00 N/A
ENST00000377840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A
ENST00000520083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A
ENST00000520154 N/A N/A N/A N/A 0.576±0.00 0.536±0.00 N/A N/A N/A 0.651±0.00 N/A 0.036±0.00 N/A N/A
ENST00000520281 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A
ENST00000522003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523145 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250850 ENST00000509911 0.078±0.00 N/A N/A 0.220±0.00 0.090±0.00 N/A 0.037±0.00 N/A 0.033±0.00 0.241±0.00 0.050±0.00 0.236±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014030 ENSMUST00000014174 0.033±0.01 0.194±0.09 N/A N/A 5.334±3.22 0.446±0.18 0.040±0.00 0.287±0.02 0.105±0.07 1.302±0.31 0.471±0.00 0.080±0.01 0.075±0.05 8.924±2.27
ENSMUST00000102932 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A
ENSMUST00000107825 N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A
ENSMUST00000107826 N/A N/A 0.017±0.00 N/A N/A N/A 0.023±0.00 0.023±0.00 N/A N/A N/A 0.067±0.00 0.042±0.00 N/A
ENSMUST00000107827 0.062±0.00 N/A 0.003±0.00 N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.147±0.09 N/A N/A
ENSMUST00000134968 N/A N/A N/A N/A N/A 0.478±0.06 N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A
ENSMUST00000146335 N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.02 N/A N/A N/A N/A N/A
ENSMUST00000165417 0.056±0.00 0.075±0.00 N/A N/A N/A N/A 0.026±0.00 0.050±0.00 0.106±0.05 N/A N/A 0.069±0.03 0.020±0.00 N/A
ENSMUST00000172866 0.052±0.00 0.161±0.00 N/A N/A 6.627±2.00 0.590±0.44 0.201±0.13 N/A 0.183±0.09 1.109±0.21 N/A N/A 0.019±0.00 N/A
ENSMUST00000172949 N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A 0.279±0.00 0.143±0.01 N/A N/A
ENSMUST00000173733 N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173821 N/A N/A N/A N/A N/A 0.585±0.00 0.124±0.00 N/A N/A N/A 1.099±0.00 N/A N/A N/A
ENSMUST00000174242 N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187197 N/A 0.836±0.00 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A N/A 0.701±0.33 N/A N/A
ENSMUST00000191036 1.085±0.00 N/A N/A 0.628±0.00 N/A N/A N/A N/A 0.543±0.00 N/A N/A N/A 0.107±0.00 N/A
ENSMUSG00000035683 ENSMUST00000045607 1.077±0.94 0.282±0.06 0.302±0.04 2.592±2.33 0.547±0.20 2.728±0.30 0.060±0.00 0.144±0.06 5.065±5.13 0.444±0.19 0.021±0.01 1.569±1.05 7.674±4.99 1.033±0.19
ENSMUST00000125708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.380±0.00 N/A
ENSMUST00000137703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137759 N/A N/A N/A N/A 0.230±0.00 N/A 0.066±0.00 0.093±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000081127 ENSMUST00000118668 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.04 N/A N/A 0.523±0.09 0.097±0.02 N/A
ENSMUSG00000083803 ENSMUST00000121242 N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A 0.164±0.07 N/A N/A N/A 0.075±0.00 0.247±0.00
ENSMUSG00000086211 ENSMUST00000140826 N/A N/A N/A 0.007±0.00 0.219±0.00 N/A N/A 0.012±0.00 0.015±0.00 N/A N/A N/A 0.005±0.00 10.920±3.87
ENSMUSG00000099065 ENSMUST00000183843 0.045±0.02 0.231±0.10 0.015±0.00 2.198±2.01 3.976±1.13 0.475±0.05 0.262±0.14 0.445±0.40 0.224±0.18 1.427±0.10 0.433±0.58 0.111±0.07 0.064±0.04 1.013±0.70

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