C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox A13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172961 Hoxa13-003 ENSMUSG00000038203 10090 - 6:52258871-52260802 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyLiverLungTestisENSMUST00000172961
Transcript ID Adipose Kidney Liver Lung Testis
ENSMUST00000172961 0.316±0.05 0.011±0.00 0.022±0.00 0.084±0.00 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OD CIL_0007OD_0003 UCNEbase 6:51462736-52602127
CIL_0008QL CIL_0008QL_0002 VISTA 6:51878169-52478777
CIL_000911 CIL_000911_0002 VISTA 6:51970433-52571615
CIL_000811 CIL_000811_0002 VISTA 6:52019082-52620287
CIL_00097P CIL_00097P_0002 VISTA 6:52142617-52744529
CIL_0003P8 CIL_0003P8_0002 CGP 6:52242106-52260880
CIL_0003P5 CIL_0003P5_0002 CGP 6:52257694-52318378

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222753 HOXA13-001 protein_coding Homo_sapiens 0 935

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