C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif, single stranded interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173429 Rbms3-007 ENSMUSG00000039607 10090 - 9:116577582-116822806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000173429
Transcript ID Adrenal Ovary
ENSMUST00000173429 4.797±0.55 11.342±2.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028F CIL_00028F_0002 CGP 9:116087698-117629913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003730 IDA mRNA 3'-UTR binding
GO:0045727 IDA positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273139 RBMS3-007 protein_coding Homo_sapiens 0 545
ENST00000383766 RBMS3-005 protein_coding Homo_sapiens 0 651
ENST00000383767 RBMS3-001 protein_coding Homo_sapiens 0 545
ENST00000434693 RBMS3-002 protein_coding Homo_sapiens 0 545
ENST00000445033 RBMS3-004 protein_coding Homo_sapiens 0 392
ENST00000452462 RBMS3-008 protein_coding Homo_sapiens 0 545
ENST00000456853 RBMS3-006 protein_coding Homo_sapiens 0 324
ENST00000497319 RBMS3-013 processed_transcript Homo_sapiens 0 462

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