C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif, single stranded interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434693 RBMS3-002 ENSG00000144642 9606 + 3:29280982-30010391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000434693
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000434693 1.113±0.00 0.616±0.00 2.526±0.47 1.312±0.42 1.101±0.16 0.929±0.00 1.515±0.00 2.645±1.69 0.824±0.63 1.005±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111773 Rbms3-001 protein_coding Mus_musculus 0 1914
ENSMUST00000174868 Rbms3-009 protein_coding Mus_musculus 0 1600
ENSMUST00000044901 Rbms3-002 protein_coding Mus_musculus 0 1408
ENSMUST00000111772 Rbms3-008 protein_coding Mus_musculus 0 1408
ENSMUST00000068962 Rbms3-006 protein_coding Mus_musculus 0 1249
ENSMUST00000164018 Rbms3-012 protein_coding Mus_musculus 0 1020
ENSMUST00000172564 Rbms3-010 protein_coding Mus_musculus 0 791
ENSMUST00000069095 Rbms3-005 retained_intron Mus_musculus 0 712
ENSMUST00000174276 Rbms3-004 processed_transcript Mus_musculus 0 614
ENSMUST00000172469 Rbms3-011 protein_coding Mus_musculus 0 612
ENSMUST00000173429 Rbms3-007 protein_coding Mus_musculus 0 545
ENSMUST00000084824 Rbms3-003 processed_transcript Mus_musculus 0 372
ENSDART00000065470 rbms2a-201 protein_coding Danio_rerio 0 363

Loading