C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: short chain dehydrogenase/reductase family 42E, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173522 Sdr42e1-001 ENSMUSG00000034308 10090 - 8:117661402-117673689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173522
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173522 4.438±1.43 1.151±0.23 23.537±6.50 0.407±0.03 5.425±0.74 13.865±0.94 1.128±0.46 3.311±0.44 36.446±33.10 3.709±1.24 0.209±0.03 2.528±0.43 5.276±2.14 1.539±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z3 CIL_0001Z3_0002 CGP 8:117498291-117673689
CIL_0001X5 CIL_0001X5_0002 CGP 8:117661399-117759029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003854 IEA 3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0005575 ND cellular_component
GO:0006694 IEA steroid biosynthetic process
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328945 SDR42E1-001 protein_coding Homo_sapiens 0 894

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