C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chondroadherin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173598 Chadl-003 ENSMUSG00000063765 10090 - 15:81678296-81694028 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000173598
Transcript ID Breast
ENSMUST00000173598 1.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RK CIL_0006RK_0002 CGP 15:81585351-81688315
CIL_0000VA CIL_0000VA_0003 CGP 15:81663889-81697287
CIL_0000V9 CIL_0000V9_0003 CGP 15:81678296-81729919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216237 L3MBTL2-001 protein_coding Homo_sapiens 0 235
ENST00000450939 L3MBTL2-009 nonsense_mediated_decay Homo_sapiens 4e-22 110
ENST00000452106 L3MBTL2-005 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000466589 L3MBTL2-004 retained_intron Homo_sapiens 0 235
ENST00000479978 L3MBTL2-002 retained_intron Homo_sapiens 0 235
ENST00000481902 L3MBTL2-003 retained_intron Homo_sapiens 0 235

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