C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation factor Tu GTP binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173974 Eftud2-011 ENSMUSG00000020929 10090 - 11:102863865-102865969 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0006U5 CIL_0006U5_0002 CGP 11:102835849-102880985
CIL_0006UA CIL_0006UA_0002 CGP 11:102838473-102885216

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017172 eftud2-201 protein_coding Danio_rerio 3e-34 150
ENSDART00000130575 eftud2-202 protein_coding Danio_rerio 3e-34 150
ENSDART00000127309 eftud2-002 protein_coding Danio_rerio 3e-34 150
ENSDART00000140067 eftud2-003 protein_coding Danio_rerio 3e-34 150
ENSDART00000136465 eftud2-001 protein_coding Danio_rerio 3e-34 150
ENST00000402521 EFTUD2-004 protein_coding Homo_sapiens 0 246
ENST00000426333 EFTUD2-002 protein_coding Homo_sapiens 0 246
ENST00000587957 EFTUD2-019 retained_intron Homo_sapiens 0.0000000003 69
ENST00000588374 EFTUD2-015 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000589475 EFTUD2-018 retained_intron Homo_sapiens 0 230
ENST00000591382 EFTUD2-006 protein_coding Homo_sapiens 0 246
ENST00000592576 EFTUD2-003 protein_coding Homo_sapiens 0 246
ENST00000593200 EFTUD2-017 retained_intron Homo_sapiens 0 246

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