C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108883-ENSG00000167131 CGP 9606 17:44849943-44905390
GeneTranscriptPositionBiotype
ENSG00000108883 (EFTUD2)
elongation factor Tu GTP binding domain containing 2 		ENST00000402521 (EFTUD2-004) 44851120-44899445 protein_coding
ENST00000426333 (EFTUD2-002) 44849943-44899662 protein_coding
ENST00000585616 (EFTUD2-022) 44860454-44865268 processed_transcript
ENST00000585794 (EFTUD2-023) 44862760-44865232 retained_intron
ENST00000586276 (EFTUD2-008) 44850810-44863595 retained_intron
ENST00000586654 (EFTUD2-021) 44862790-44868399 retained_intron
ENST00000586875 (EFTUD2-016) 44880477-44881843 retained_intron
ENST00000587914 (EFTUD2-024) 44862753-44864062 retained_intron
ENST00000587957 (EFTUD2-019) 44875633-44879590 retained_intron
ENST00000588340 (EFTUD2-028) 44854975-44857639 retained_intron
ENST00000588374 (EFTUD2-015) 44876089-44894497 nonsense_mediated_decay
ENST00000589211 (EFTUD2-029) 44886663-44892329 processed_transcript
ENST00000589475 (EFTUD2-018) 44879516-44880630 retained_intron
ENST00000589769 (EFTUD2-026) 44851257-44854662 nonsense_mediated_decay
ENST00000589825 (EFTUD2-010) 44883556-44899445 retained_intron
ENST00000590105 (EFTUD2-013) 44894134-44899403 retained_intron
ENST00000590124 (EFTUD2-025) 44851047-44857121 protein_coding
ENST00000590367 (EFTUD2-007) 44850916-44873167 retained_intron
ENST00000590977 (EFTUD2-009) 44850917-44859649 retained_intron
ENST00000591382 (EFTUD2-006) 44850916-44899368 protein_coding
ENST00000591856 (EFTUD2-020) 44864970-44872526 nonsense_mediated_decay
ENST00000592408 (EFTUD2-012) 44885256-44899403 retained_intron
ENST00000592576 (EFTUD2-003) 44850866-44899431 protein_coding
ENST00000592701 (EFTUD2-014) 44885287-44899049 protein_coding
ENST00000593072 (EFTUD2-011) 44883140-44899403 protein_coding
ENST00000593200 (EFTUD2-017) 44875939-44881835 retained_intron
ENSG00000131095 (GFAP)
glial fibrillary acidic protein 		ENST00000253408 (GFAP-001) 44905626-44915552 protein_coding
ENST00000376990 (GFAP-004) 44911303-44915500 nonsense_mediated_decay
ENST00000435360 (GFAP-002) 44909667-44915494 protein_coding
ENST00000585543 (GFAP-014) 44907228-44911515 retained_intron
ENST00000585728 (GFAP-020) 44913313-44915500 nonsense_mediated_decay
ENST00000586125 (GFAP-019) 44908099-44910636 protein_coding
ENST00000586127 (GFAP-009) 44913352-44914376 protein_coding
ENST00000586793 (GFAP-024) 44910349-44915494 protein_coding
ENST00000587997 (GFAP-011) 44911268-44913696 protein_coding
ENST00000588037 (GFAP-006) 44913799-44915503 protein_coding
ENST00000588316 (GFAP-018) 44911697-44915488 protein_coding
ENST00000588640 (GFAP-012) 44908135-44912934 processed_transcript
ENST00000588735 (GFAP-008) 44906974-44915500 protein_coding
ENST00000588957 (GFAP-021) 44911674-44915951 protein_coding
ENST00000589701 (GFAP-017) 44906885-44908222 retained_intron
ENST00000590922 (GFAP-010) 44911672-44913698 retained_intron
ENST00000591327 (GFAP-007) 44913406-44915500 processed_transcript
ENST00000591719 (GFAP-013) 44911412-44912767 processed_transcript
ENST00000591880 (GFAP-015) 44907650-44910651 protein_coding
ENST00000592065 (GFAP-025) 44905008-44908114 processed_transcript
ENST00000592320 (GFAP-005) 44910619-44915504 protein_coding
ENST00000592706 (GFAP-016) 44906939-44909752 processed_transcript
ENST00000593179 (GFAP-023) 44915461-44916937 protein_coding
ENSG00000264540 (RN7SL405P)
RNA, 7SL, cytoplasmic 405, pseudogene 		ENST00000582502 (RN7SL405P-201) 44883986-44884274 misc_RNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0006UA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020929-ENSMUSG00000020930 CGP 10090 11:102838473-102885216
GeneTranscriptPositionBiotype
ENSMUSG00000020929 (Eftud2)
elongation factor Tu GTP binding domain containing 2 		ENSMUST00000021306 (Eftud2-002) 102838473-102880967 protein_coding
ENSMUST00000107060 (Eftud2-001) 102838473-102880985 protein_coding
ENSMUST00000123833 (Eftud2-003) 102865862-102880964 retained_intron
ENSMUST00000131678 (Eftud2-006) 102849194-102860221 retained_intron
ENSMUST00000132543 (Eftud2-008) 102838838-102841238 nonsense_mediated_decay
ENSMUST00000138483 (Eftud2-010) 102862611-102877690 nonsense_mediated_decay
ENSMUST00000141273 (Eftud2-007) 102840211-102847979 retained_intron
ENSMUST00000143323 (Eftud2-009) 102839450-102840675 retained_intron
ENSMUST00000147368 (Eftud2-005) 102869935-102877715 retained_intron
ENSMUST00000148209 (Eftud2-004) 102876964-102880935 retained_intron
ENSMUST00000172611 (Eftud2-013) 102838477-102844218 protein_coding
ENSMUST00000173679 (Eftud2-012) 102838801-102877714 protein_coding
ENSMUST00000173974 (Eftud2-011) 102863865-102865969 retained_intron
ENSMUSG00000020930 (Ccdc103)
coiled-coil domain containing 103 		ENSMUST00000021307 (Ccdc103-001) 102881204-102885216 protein_coding
ENSMUST00000159834 (Ccdc103-002) 102881245-102884523 protein_coding
ENSMUSG00000075510 (Fam187a)
family with sequence similarity 187, member A 		ENSMUST00000100369 (Fam187a-001) 102885169-102886731 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UA_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000589825ENST00000590124ENST00000591382ENST00000592576ENSG00000131095ENST00000253408ENST00000585728ENSG00000264540ENST00000582502CIL_0006UA_0002ENSMUSG00000020929ENSMUST00000021306ENSMUST00000107060ENSMUST00000138483ENSMUST00000141273ENSMUST00000143323ENSMUST00000147368ENSMUST00000173679ENSMUSG00000020930ENSMUST00000021307ENSMUST00000159834ENSMUSG00000075510ENSMUST00000100369
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108883 ENST00000402521 12.476±0.00 9.376±0.00 2.383±0.00 N/A 5.983±1.57 4.871±0.88 4.718±2.88 4.781±3.08 3.151±0.14 4.616±0.40 10.796±7.24 10.575±2.99 12.308±3.11 16.322±0.00
ENST00000426333 N/A N/A N/A N/A N/A 1.817±0.00 2.542±0.00 N/A N/A N/A N/A 3.033±0.00 7.960±2.55 N/A
ENST00000585616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589825 N/A N/A 12.509±0.00 N/A 18.722±0.00 21.226±0.00 9.707±0.00 8.594±0.00 13.691±0.00 18.896±0.00 6.872±0.00 50.675±0.00 N/A N/A
ENST00000590105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590124 N/A 23.885±0.00 N/A N/A N/A N/A N/A 15.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591382 N/A N/A N/A N/A N/A N/A N/A 1.251±0.00 N/A N/A N/A 19.787±0.00 9.280±0.00 N/A
ENST00000591856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592576 7.076±0.00 11.413±0.00 N/A N/A 10.156±0.00 4.839±0.00 5.884±0.00 9.414±0.00 4.806±0.00 5.660±0.00 14.169±0.00 13.297±2.84 10.254±2.08 17.057±0.57
ENST00000592701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131095 ENST00000253408 N/A N/A N/A 433.548±315.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585728 N/A N/A N/A 257.251±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264540 ENST00000582502 1.379±0.00 3.812±0.00 N/A 2.584±0.00 1.192±0.00 1.023±0.00 0.393±0.00 1.767±0.00 0.760±0.00 1.689±0.00 0.481±0.00 2.036±1.81 N/A 1.026±0.36
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020929 ENSMUST00000021306 3.365±0.00 N/A 2.420±0.00 N/A N/A N/A 3.149±0.47 2.991±0.26 4.606±2.63 N/A 1.560±0.30 6.424±0.00 N/A 5.738±2.23
ENSMUST00000107060 17.275±4.45 4.120±0.54 22.271±3.36 38.234±10.49 10.678±3.17 4.408±0.73 8.187±2.36 12.342±2.33 18.503±18.42 18.562±2.39 6.409±0.90 14.265±6.89 28.266±9.81 17.026±5.23
ENSMUST00000123833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138483 N/A N/A N/A 52.913±0.00 N/A N/A N/A N/A N/A N/A N/A 42.442±0.00 75.688±19.13 N/A
ENSMUST00000141273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.995±7.59 61.611±10.36 35.932±0.00
ENSMUST00000143323 N/A 34.139±6.63 N/A N/A 19.177±0.00 N/A N/A N/A N/A 29.769±2.47 N/A N/A N/A N/A
ENSMUST00000147368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.332±0.00 N/A N/A
ENSMUST00000148209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173679 6.172±0.00 5.117±1.46 N/A N/A 8.207±2.36 5.172±1.12 N/A 4.367±1.98 3.288±0.60 N/A N/A 14.235±3.84 N/A N/A
ENSMUST00000173974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020930 ENSMUST00000021307 0.057±0.05 0.233±0.11 0.149±0.05 0.378±0.16 0.153±0.08 0.120±0.00 0.091±0.02 0.432±0.10 0.153±0.09 0.640±0.20 0.067±0.02 0.515±0.33 0.086±0.07 4.760±1.91
ENSMUST00000159834 0.054±0.00 0.395±0.27 0.176±0.03 0.275±0.11 0.110±0.05 0.159±0.09 0.066±0.03 0.265±0.18 0.225±0.14 0.256±0.00 0.045±0.00 0.956±0.38 0.059±0.02 9.652±2.52
ENSMUSG00000075510 ENSMUST00000100369 0.038±0.00 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A 0.149±0.00 N/A 9.610±0.26

Loading