C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006U5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131097-ENSG00000108883 CGP 9606 17:44846353-44899662
GeneTranscriptPositionBiotype
ENSG00000108883 (EFTUD2)
elongation factor Tu GTP binding domain containing 2 		ENST00000402521 (EFTUD2-004) 44851120-44899445 protein_coding
ENST00000426333 (EFTUD2-002) 44849943-44899662 protein_coding
ENST00000585616 (EFTUD2-022) 44860454-44865268 processed_transcript
ENST00000585794 (EFTUD2-023) 44862760-44865232 retained_intron
ENST00000586276 (EFTUD2-008) 44850810-44863595 retained_intron
ENST00000586654 (EFTUD2-021) 44862790-44868399 retained_intron
ENST00000586875 (EFTUD2-016) 44880477-44881843 retained_intron
ENST00000587914 (EFTUD2-024) 44862753-44864062 retained_intron
ENST00000587957 (EFTUD2-019) 44875633-44879590 retained_intron
ENST00000588340 (EFTUD2-028) 44854975-44857639 retained_intron
ENST00000588374 (EFTUD2-015) 44876089-44894497 nonsense_mediated_decay
ENST00000589211 (EFTUD2-029) 44886663-44892329 processed_transcript
ENST00000589475 (EFTUD2-018) 44879516-44880630 retained_intron
ENST00000589769 (EFTUD2-026) 44851257-44854662 nonsense_mediated_decay
ENST00000589825 (EFTUD2-010) 44883556-44899445 retained_intron
ENST00000590105 (EFTUD2-013) 44894134-44899403 retained_intron
ENST00000590124 (EFTUD2-025) 44851047-44857121 protein_coding
ENST00000590367 (EFTUD2-007) 44850916-44873167 retained_intron
ENST00000590977 (EFTUD2-009) 44850917-44859649 retained_intron
ENST00000591382 (EFTUD2-006) 44850916-44899368 protein_coding
ENST00000591856 (EFTUD2-020) 44864970-44872526 nonsense_mediated_decay
ENST00000592408 (EFTUD2-012) 44885256-44899403 retained_intron
ENST00000592576 (EFTUD2-003) 44850866-44899431 protein_coding
ENST00000592701 (EFTUD2-014) 44885287-44899049 protein_coding
ENST00000593072 (EFTUD2-011) 44883140-44899403 protein_coding
ENST00000593200 (EFTUD2-017) 44875939-44881835 retained_intron
ENSG00000264540 (RN7SL405P)
RNA, 7SL, cytoplasmic 405, pseudogene 		ENST00000582502 (RN7SL405P-201) 44883986-44884274 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006U5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020928-ENSMUSG00000020929 CGP 10090 11:102835849-102880985
GeneTranscriptPositionBiotype
ENSMUSG00000020928 (Higd1b)
HIG1 domain family, member 1B 		ENSMUST00000021302 (Higd1b-001) 102836296-102838040 protein_coding
ENSMUST00000107072 (Higd1b-003) 102836446-102838040 protein_coding
ENSMUST00000107073 (Higd1b-002) 102835849-102838040 protein_coding
ENSMUSG00000020929 (Eftud2)
elongation factor Tu GTP binding domain containing 2 		ENSMUST00000021306 (Eftud2-002) 102838473-102880967 protein_coding
ENSMUST00000107060 (Eftud2-001) 102838473-102880985 protein_coding
ENSMUST00000123833 (Eftud2-003) 102865862-102880964 retained_intron
ENSMUST00000131678 (Eftud2-006) 102849194-102860221 retained_intron
ENSMUST00000132543 (Eftud2-008) 102838838-102841238 nonsense_mediated_decay
ENSMUST00000138483 (Eftud2-010) 102862611-102877690 nonsense_mediated_decay
ENSMUST00000141273 (Eftud2-007) 102840211-102847979 retained_intron
ENSMUST00000143323 (Eftud2-009) 102839450-102840675 retained_intron
ENSMUST00000147368 (Eftud2-005) 102869935-102877715 retained_intron
ENSMUST00000148209 (Eftud2-004) 102876964-102880935 retained_intron
ENSMUST00000172611 (Eftud2-013) 102838477-102844218 protein_coding
ENSMUST00000173679 (Eftud2-012) 102838801-102877714 protein_coding
ENSMUST00000173974 (Eftud2-011) 102863865-102865969 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U5_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000585616ENST00000585794ENST00000586276ENST00000586654ENST00000586875ENST00000587914ENST00000587957ENST00000588340ENST00000588374ENST00000589211ENST00000589475ENST00000589769ENST00000589825ENST00000590105ENST00000590124ENST00000590367ENST00000590977ENST00000591382ENST00000591856ENST00000592408ENST00000592576ENST00000592701ENST00000593072ENST00000593200ENSG00000264540ENST00000582502CIL_0006U5_0002ENSMUSG00000020928ENSMUST00000021302ENSMUST00000107072ENSMUST00000107073ENSMUSG00000020929ENSMUST00000021306ENSMUST00000107060ENSMUST00000123833ENSMUST00000131678ENSMUST00000132543ENSMUST00000138483ENSMUST00000141273ENSMUST00000143323ENSMUST00000147368ENSMUST00000148209ENSMUST00000172611ENSMUST00000173679ENSMUST00000173974
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006U5_0001ENSG00000108883ENST00000402521ENST00000426333ENST00000589825ENST00000590124ENST00000591382ENST00000592576ENSG00000264540ENST00000582502CIL_0006U5_0002ENSMUSG00000020928ENSMUST00000021302ENSMUST00000107072ENSMUST00000107073ENSMUSG00000020929ENSMUST00000021306ENSMUST00000107060ENSMUST00000138483ENSMUST00000141273ENSMUST00000143323ENSMUST00000147368ENSMUST00000173679
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108883 ENST00000402521 12.476±0.00 9.376±0.00 2.383±0.00 N/A 5.983±1.57 4.871±0.88 4.718±2.88 4.781±3.08 3.151±0.14 4.616±0.40 10.796±7.24 10.575±2.99 12.308±3.11 16.322±0.00
ENST00000426333 N/A N/A N/A N/A N/A 1.817±0.00 2.542±0.00 N/A N/A N/A N/A 3.033±0.00 7.960±2.55 N/A
ENST00000585616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589825 N/A N/A 12.509±0.00 N/A 18.722±0.00 21.226±0.00 9.707±0.00 8.594±0.00 13.691±0.00 18.896±0.00 6.872±0.00 50.675±0.00 N/A N/A
ENST00000590105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590124 N/A 23.885±0.00 N/A N/A N/A N/A N/A 15.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591382 N/A N/A N/A N/A N/A N/A N/A 1.251±0.00 N/A N/A N/A 19.787±0.00 9.280±0.00 N/A
ENST00000591856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592576 7.076±0.00 11.413±0.00 N/A N/A 10.156±0.00 4.839±0.00 5.884±0.00 9.414±0.00 4.806±0.00 5.660±0.00 14.169±0.00 13.297±2.84 10.254±2.08 17.057±0.57
ENST00000592701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264540 ENST00000582502 1.379±0.00 3.812±0.00 N/A 2.584±0.00 1.192±0.00 1.023±0.00 0.393±0.00 1.767±0.00 0.760±0.00 1.689±0.00 0.481±0.00 2.036±1.81 N/A 1.026±0.36
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020928 ENSMUST00000021302 6.678±2.60 1.537±0.51 0.998±0.02 0.968±0.73 2.501±0.88 0.403±0.13 7.142±0.79 1.603±0.45 0.053±0.03 6.785±1.24 1.608±0.45 1.985±1.20 4.004±2.88 0.475±0.19
ENSMUST00000107072 N/A 0.736±0.00 N/A N/A N/A 0.792±0.64 N/A N/A N/A N/A 0.459±0.00 0.905±0.22 1.110±0.98 0.943±0.00
ENSMUST00000107073 4.058±1.70 1.072±0.00 0.707±0.20 2.496±1.86 0.764±0.21 N/A 1.613±0.00 0.264±0.00 N/A 31.665±3.19 0.767±0.00 1.883±0.73 3.135±0.00 0.552±0.35
ENSMUSG00000020929 ENSMUST00000021306 3.365±0.00 N/A 2.420±0.00 N/A N/A N/A 3.149±0.47 2.991±0.26 4.606±2.63 N/A 1.560±0.30 6.424±0.00 N/A 5.738±2.23
ENSMUST00000107060 17.275±4.45 4.120±0.54 22.271±3.36 38.234±10.49 10.678±3.17 4.408±0.73 8.187±2.36 12.342±2.33 18.503±18.42 18.562±2.39 6.409±0.90 14.265±6.89 28.266±9.81 17.026±5.23
ENSMUST00000123833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138483 N/A N/A N/A 52.913±0.00 N/A N/A N/A N/A N/A N/A N/A 42.442±0.00 75.688±19.13 N/A
ENSMUST00000141273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.995±7.59 61.611±10.36 35.932±0.00
ENSMUST00000143323 N/A 34.139±6.63 N/A N/A 19.177±0.00 N/A N/A N/A N/A 29.769±2.47 N/A N/A N/A N/A
ENSMUST00000147368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.332±0.00 N/A N/A
ENSMUST00000148209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173679 6.172±0.00 5.117±1.46 N/A N/A 8.207±2.36 5.172±1.12 N/A 4.367±1.98 3.288±0.60 N/A N/A 14.235±3.84 N/A N/A
ENSMUST00000173974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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