C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173988 Krt35-002 ENSMUSG00000048013 10090 - 11:100092195-100096241 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleTestisENSMUST00000173988
Transcript ID Lung Muscle Testis
ENSMUST00000173988 0.050±0.00 0.057±0.00 0.035±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0013 CGP 11:100080848-100096241
CIL_00056U CIL_00056U_0014 CGP 11:100092193-100105626

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225550 KRT37-001 protein_coding Homo_sapiens 0 302
ENST00000225899 KRT32-001 protein_coding Homo_sapiens 0 255
ENST00000246639 KRT35-001 protein_coding Homo_sapiens 0 1005
ENST00000246646 KRT38-001 protein_coding Homo_sapiens 0 329
ENST00000251645 KRT31-001 protein_coding Homo_sapiens 0 230
ENST00000393988 KRT41P-001 unprocessed_pseudogene Homo_sapiens 1.00053e-42 178
ENST00000393989 KRT35-201 protein_coding Homo_sapiens 0 1005
ENST00000394001 KRT34-001 protein_coding Homo_sapiens 0 213
ENST00000571312 RP1-18F17.1-001 protein_coding Homo_sapiens 0 219
ENST00000572799 AC003958.1-001 unprocessed_pseudogene Homo_sapiens 1.00053e-42 178
ENST00000573281 KRT31-001 protein_coding Homo_sapiens 0 230
ENST00000574588 KRT37-001 protein_coding Homo_sapiens 0 302
ENST00000576522 AC004231.7-001 protein_coding Homo_sapiens 0 213

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