C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific methyltransferase 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174734 Kmt2c-006 ENSMUSG00000038056 10090 - 5:25271798-25300075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000174734
Transcript ID Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000174734 3.420±0.34 3.386±1.71 0.852±0.38 1.094±0.17 2.601±0.51 3.081±0.47 0.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_00027A CIL_00027A_0002 CGP 5:25222882-25498783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISO nucleus
GO:0008270 IEA zinc ion binding
GO:0035097 ISO histone methyltransferase complex
GO:0042800 ISO histone methyltransferase activity (H3-K4 specific)
GO:0051568 ISO histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137010 kmt2ca-001 protein_coding Danio_rerio 5e-23 115
ENST00000262189 KMT2C-001 protein_coding Homo_sapiens 0 5854
ENST00000355193 KMT2C-201 protein_coding Homo_sapiens 0 5854
ENST00000360104 KMT2C-009 protein_coding Homo_sapiens 0 3463
ENST00000418061 KMT2C-015 protein_coding Homo_sapiens 0 689
ENST00000424877 KMT2C-010 protein_coding Homo_sapiens 0 6305
ENST00000473186 KMT2C-002 retained_intron Homo_sapiens 0 3773
ENST00000485241 KMT2C-016 processed_transcript Homo_sapiens 0 460
ENST00000558084 KMT2C-018 nonsense_mediated_decay Homo_sapiens 0 5854

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